SEED Subsystem: Entner-Doudoroff Pathway in Variovorax sp. OAS795

Experiments:

Role Gene Name butyrate (C)  
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) No genes
2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal type (EC 5.4.2.1) No genes
2-dehydro-3-deoxygluconate aldolase (EC 4.1.2-) No genes
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) ABID97_RS20030 -0.2
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) No genes
6-phosphogluconolactonase (EC 3.1.1.31) No genes
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type No genes
Aldehyde dehydrogenase (EC 1.2.1.3) ABID97_RS13510 -0.1
  ABID97_RS13535 -0.2
  ABID97_RS15020 -0.1
  ABID97_RS18885 +0.4
  ABID97_RS25410 N.D.
  ABID97_RS25710 N.D.
  ABID97_RS25990 +0.0
  ABID97_RS28560 N.D.
  ABID97_RS29450 -0.2
D-glycerate 2-kinase (EC 2.7.1.-) ABID97_RS22180 +0.4
  ABID97_RS27670 +0.2
Enolase (EC 4.2.1.11) ABID97_RS20195 N.D.
  ABID97_RS28005 -2.2
  ABID97_RS28010 N.D.
Glucokinase (EC 2.7.1.2) No genes
Gluconate dehydratase (EC 4.2.1.39) No genes
Gluconokinase (EC 2.7.1.12) ABID97_RS10185 N.D.
Gluconolactonase (EC 3.1.1.17) ABID97_RS03640 -0.4
  ABID97_RS05425 -0.1
  ABID97_RS10345 +0.1
  ABID97_RS11240 -0.0
  ABID97_RS21840 +0.1
  ABID97_RS29010 +0.3
  ABID97_RS29300 +0.0
Glucose 1-dehydrogenase (EC 1.1.1.47) No genes
Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2) ABID97_RS01155 -0.1
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) ABID97_RS07065 -0.3
Hexokinase (EC 2.7.1.1) No genes
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) ABID97_RS02440 N.D.
Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NAD) No genes
Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9) No genes
OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial No genes
OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, cyanobacterial No genes
Phosphogluconate dehydratase (EC 4.2.1.12) ABID97_RS21300 +0.8
Phosphoglycerate kinase (EC 2.7.2.3) ABID97_RS01760 N.D.
  ABID97_RS12890 N.D.
Phosphoglycerate mutase (EC 5.4.2.1) ABID97_RS06495 +2.6
  ABID97_RS07385 N.D.
  ABID97_RS23825 N.D.
Polyphosphate glucokinase (EC 2.7.1.63) No genes
Pyruvate kinase (EC 2.7.1.40) ABID97_RS01755 -0.8
  ABID97_RS24455 -0.4
  ABID97_RS27675 +0.0

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