SEED Subsystem: Proteolysis in bacteria, ATP-dependent in Pseudomonas putida KT2440

Experiments:

Role Gene Name Valerolactone (C)  
⨯
ATP-dependent Clp protease ATP-binding subunit ClpA PP_3316 +0.1
  PP_4008 -0.0
ATP-dependent Clp protease ATP-binding subunit ClpX PP_2301 N.D.
ATP-dependent Clp protease adaptor protein ClpS PP_4009 -1.8
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) PP_2300 N.D.
ATP-dependent Clp protease, ATP-binding subunit ClpC No genes
ATP-dependent hsl protease ATP-binding subunit HslU PP_5001 +0.5
ATP-dependent protease HslV (EC 3.4.25.-) PP_5000 -0.5
ATP-dependent protease La (EC 3.4.21.53) No genes
ATP-dependent protease La (EC 3.4.21.53) Type I PP_1443 +0.0
  PP_2302 -0.3
ATP-dependent protease La (EC 3.4.21.53) Type II PP_0680 -0.0
ATP-dependent protease domain protein (EC 3.4.21.-) No genes
ATPase, AFG1 family PP_1312 N.D.
ClpB protein PP_0625 -0.1
  PP_3095 -0.2
ClpXP protease specificity-enhancing factor No genes
Nucleotide excision repair protein, with UvrB/UvrC motif No genes
Outer membrane stress sensor protease DegQ, serine protease No genes
Outer membrane stress sensor protease DegS PP_1301 -1.9

Or select organism:

Or view this subsystem at the SEED (slow)