SEED Subsystem: cAMP signaling in bacteria in Pseudomonas putida KT2440

Experiments:

Role Gene Name Nicotinic Acid (N)  
3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) PP_4917 -0.5
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) PP_2300 N.D.
Adenine phosphoribosyltransferase (EC 2.4.2.7) PP_4266 -0.3
Adenylate cyclase (EC 4.6.1.1) PP_5187 -0.1
  PP_5222 -0.0
Adenylate/guanylate cyclase (EC 4.6.1.2) No genes
CAMP phosphodiesterases class-II:Metallo-beta-lactamase superfamily No genes
Cyclic AMP receptor protein PP_0424 +0.0
ElaA protein PP_4956 +0.2
Heme-regulated cyclic AMP phosphodiesterase (EC 3.1.4.-) No genes
Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase PP_1829 -0.3
  PP_2567 -0.2
  PP_3943 -1.6
  PP_5117 +0.2
Predicted signal-transduction protein containing cAMP-binding and CBS domains PP_0354 -0.0
Prophage Clp protease-like protein PP_3045 -0.1
Purine cyclase-related protein No genes
Putative Heme-regulated two-component response regulator PP_2413 +0.1
Putative hemin-binding lipoprotein No genes
Putative insecticidal toxin complex No genes
adenylate cyclase ExoY No genes
anthrax toxin moiety, protective antigen, pagA formerly pag, plasmid pXO1, B. anthracis (M22589, P13423) No genes
bifunctional hemolysin-adenylate cyclase precursor No genes
cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases PP_5256 -0.1
cAMP-dependent Kef-type K+ transport system No genes
calmodulin sensitive adenylate cyclase, edema factor, cya, plasmid pXO1, B. anthracis (M23179, M24074) No genes
cyclolysin secretion ATP-binding protein PP_4927 +0.0
cyclolysin secretion protein No genes
cyclolysin-activating lysine-acyltransferase No genes
trans-acting positive regulator (Atx A) No genes
transcriptional activator AtxA, (pXO1-119) No genes

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