SEED Subsystem: Proteolysis in bacteria, ATP-dependent in Agrobacterium fabrum C58

Experiments:

Role Gene Name Streptomycin 200 ug/mL  
⨯
ATP-dependent Clp protease ATP-binding subunit ClpA Atu1364 -2.2
ATP-dependent Clp protease ATP-binding subunit ClpX Atu1259 N.D.
ATP-dependent Clp protease adaptor protein ClpS Atu1363 N.D.
  Atu2232 -0.1
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Atu1258 -0.5
  Atu1627 +0.2
  Atu2270 -0.5
ATP-dependent Clp protease, ATP-binding subunit ClpC No genes
ATP-dependent hsl protease ATP-binding subunit HslU Atu0045 -1.8
ATP-dependent protease HslV (EC 3.4.25.-) Atu0044 -1.9
ATP-dependent protease La (EC 3.4.21.53) No genes
ATP-dependent protease La (EC 3.4.21.53) Type I Atu1261 N.D.
ATP-dependent protease La (EC 3.4.21.53) Type II No genes
ATP-dependent protease domain protein (EC 3.4.21.-) No genes
ATPase, AFG1 family No genes
ClpB protein Atu4177 +0.5
  Atu4344 +0.3
ClpXP protease specificity-enhancing factor No genes
Nucleotide excision repair protein, with UvrB/UvrC motif No genes
Outer membrane stress sensor protease DegQ, serine protease No genes
Outer membrane stress sensor protease DegS No genes

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