SEED Subsystem: cAMP signaling in bacteria in Agrobacterium fabrum C58

Experiments:

Role Gene Name Chloramphenicol 12.5 ug/mL  
3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) Atu0395 -0.0
  Atu2243 -0.0
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Atu1258 +1.0
  Atu1627 -0.5
  Atu2270 -0.2
Adenine phosphoribosyltransferase (EC 2.4.2.7) Atu2236 -0.3
Adenylate cyclase (EC 4.6.1.1) Atu1149 -2.9
  Atu2580 +0.0
  Atu4013 -0.1
Adenylate/guanylate cyclase (EC 4.6.1.2) No genes
CAMP phosphodiesterases class-II:Metallo-beta-lactamase superfamily No genes
Cyclic AMP receptor protein No genes
ElaA protein Atu1478 +0.5
Heme-regulated cyclic AMP phosphodiesterase (EC 3.1.4.-) No genes
Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase No genes
Predicted signal-transduction protein containing cAMP-binding and CBS domains No genes
Prophage Clp protease-like protein No genes
Purine cyclase-related protein No genes
Putative Heme-regulated two-component response regulator No genes
Putative hemin-binding lipoprotein No genes
Putative insecticidal toxin complex No genes
adenylate cyclase ExoY No genes
anthrax toxin moiety, protective antigen, pagA formerly pag, plasmid pXO1, B. anthracis (M22589, P13423) No genes
bifunctional hemolysin-adenylate cyclase precursor No genes
cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Atu1037 +0.1
  Atu2578 +2.2
  Atu2762 -0.2
  Atu4304 -0.1
  Atu5484 -0.3
  Atu5488 +0.1
cAMP-dependent Kef-type K+ transport system No genes
calmodulin sensitive adenylate cyclase, edema factor, cya, plasmid pXO1, B. anthracis (M23179, M24074) No genes
cyclolysin secretion ATP-binding protein No genes
cyclolysin secretion protein No genes
cyclolysin-activating lysine-acyltransferase No genes
trans-acting positive regulator (Atx A) No genes
transcriptional activator AtxA, (pXO1-119) No genes

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