SEED Subsystem: Pyruvate Alanine Serine Interconversions in Pseudomonas putida KT2440

Experiments:

Role Gene Name Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs  
⨯
Alanine dehydrogenase (EC 1.4.1.1) No genes
Alanine racemase (EC 5.1.1.1) PP_3722 -0.5
  PP_5269 N.D.
Alanine racemase, biosynthetic (EC 5.1.1.1) No genes
Alanine racemase, catabolic (EC 5.1.1.1) No genes
Branched-chain amino acid aminotransferase (EC 2.6.1.42) PP_3511 +0.2
D-alanine aminotransferase (EC 2.6.1.21) No genes
D-amino acid dehydrogenase small subunit (EC 1.4.99.1) PP_3596 -1.7
  PP_4311 +0.2
  PP_4434 +0.1
  PP_5270 -0.3
D-serine dehydratase (EC 4.3.1.18) No genes
D-serine/D-alanine/glycine transporter PP_1059 -0.0
  PP_4840 +0.3
L-alanine:glyoxylate aminotransferase (EC 2.6.1.44) No genes
L-serine dehydratase (EC 4.3.1.17) No genes
L-serine dehydratase, alpha subunit (EC 4.3.1.17) PP_3144 -0.4
L-serine dehydratase, beta subunit (EC 4.3.1.17) PP_3144 -0.4
Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) PP_0596 -0.3
  PP_3718 -0.5
  PP_5182 +0.3
Predicted L-serine dehydratase (EC 4.3.1.17) TdcG No genes
Serine transporter PP_3589 +0.5
Valine--pyruvate aminotransferase (EC 2.6.1.66) PP_3721 -0.1

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Or view this subsystem at the SEED (slow)