SEED Subsystem: Flagellar motility in Pseudomonas putida KT2440

Experiments:

Role Gene Name Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs  
⨯
Chemotaxis protein CheV (EC 2.7.3.-) PP_0802 +0.3
  PP_2128 +0.3
  PP_4393 -0.4
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY PP_0768 -0.7
  PP_3758 -0.1
  PP_4340 -1.3
Flagellar L-ring protein FlgH PP_4384 -2.3
Flagellar basal-body rod modification protein FlgD PP_4389 -1.2
Flagellar biosynthesis protein FlhA PP_4344 -1.7
Flagellar biosynthesis protein FlhB PP_4352 -1.6
Flagellar biosynthesis protein FlhF PP_4343 -1.4
Flagellar biosynthesis protein FliR PP_4353 -1.9
Flagellar motor rotation protein MotA PP_4336 -1.0
  PP_4905 -1.2
Flagellar motor rotation protein MotB PP_4335 -1.2
  PP_4904 -1.5
Flagellar motor switch protein FliM PP_4358 -2.5
Flagellar motor switch protein FliN PP_4357 N.D.
Flagellar synthesis regulator FleN PP_4342 -3.2
Flagellin No genes
Flagellum-specific ATP synthase FliI PP_4366 -2.1
Motility accessory factor No genes
Motility integral membrane protein No genes
Predicted signal transduction protein PP_1422 +0.3
  PP_4906 -0.5
  PP_5126 +0.0
  PP_5311 -0.0
Putative lipoprotein required for motility No genes
RNA polymerase sigma factor for flagellar operon PP_4341 -2.4
RNA polymerase sigma-54 factor RpoN PP_0952 N.D.
  PP_2888 N.D.
Rrf2 family transcriptional regulator No genes
Signal transduction histidine kinase CheA (EC 2.7.3.-) PP_4338 -0.9
  PP_4988 -1.1
Signal transduction protein CetA, mediates an energy taxis response No genes
Signal transduction protein CetB, mediates an energy taxis response No genes

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