SEED Subsystem: DNA-replication in Acinetobacter radioresistens SK82

Experiments:

Role Gene Name L-Aspartic Acid (N)  
⨯
ATP-dependent DNA helicase RecG (EC 3.6.1.-) MPMX26_02732 +0.5
ATP-dependent DNA helicase RecQ No genes
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA MPMX26_00001 N.D.
  MPMX26_02204 +1.1
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) MPMX26_01780 N.D.
DNA polymerase I (EC 2.7.7.7) MPMX26_00574 +1.5
DNA polymerase II (EC 2.7.7.7) No genes
DNA polymerase III alpha subunit (EC 2.7.7.7) MPMX26_01875 N.D.
DNA polymerase III beta subunit (EC 2.7.7.7) MPMX26_00002 N.D.
DNA polymerase III chi subunit (EC 2.7.7.7) MPMX26_00156 +0.1
DNA polymerase III delta prime subunit (EC 2.7.7.7) MPMX26_01222 N.D.
DNA polymerase III delta subunit (EC 2.7.7.7) MPMX26_00468 N.D.
DNA polymerase III epsilon subunit (EC 2.7.7.7) MPMX26_02275 +0.5
DNA polymerase III psi subunit (EC 2.7.7.7) No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) MPMX26_01745 N.D.
  MPMX26_02987 +0.1
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) MPMX26_00497 N.D.
  MPMX26_00733 N.D.
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN MPMX26_00239 -0.1
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) MPMX26_00273 +0.3
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) MPMX26_00272 +0.9
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) MPMX26_00271 +0.9
Helicase PriA essential for oriC/DnaA-independent DNA replication MPMX26_00282 N.D.
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA MPMX26_02185 -0.1
Holliday junction DNA helicase RuvB MPMX26_02186 +0.8
Primosomal protein I MPMX26_01394 N.D.
  MPMX26_01830 N.D.
  MPMX26_02088 N.D.
Primosomal replication protein N No genes
Primosomal replication protein N prime prime No genes
RecA protein MPMX26_01308 +1.1
Recombination protein RecR MPMX26_01643 -0.2
Replicative DNA helicase (EC 3.6.1.-) MPMX26_01154 N.D.
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) MPMX26_00604 +1.5
  MPMX26_02917 +0.1
Transcription-repair coupling factor MPMX26_01319 +0.1

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