SEED Subsystem: tRNA processing in Escherichia coli ECOR27

Experiments:

Role Gene Name Bas69  
⨯
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase No genes
Ribonuclease BN (EC 3.1.-.-) No genes
Ribonuclease D (EC 3.1.26.3) NOLOHH_17125 rnd +0.0
Ribonuclease P protein component (EC 3.1.26.5) NOLOHH_07135 rnpA N.D.
Ribonuclease PH (EC 2.7.7.56) NOLOHH_07470 rph -0.5
Ribonuclease T (EC 3.1.13.-) NOLOHH_17945 rnt N.D.
Ribonuclease Z (EC 3.1.26.11) NOLOHH_14540 +0.5
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) NOLOHH_12290 truD +0.2
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) NOLOHH_14305 truA -1.1
tRNA pseudouridine synthase B (EC 4.2.1.70) NOLOHH_09925 truB -1.8
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase NOLOHH_23605 miaB +2.1
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) NOLOHH_13135 tadA N.D.
tRNAHis-5'-guanylyltransferase No genes

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