SEED Subsystem: Transcription initiation, bacterial sigma factors in Pseudomonas syringae pv. syringae B728a ΔmexB

Experiments:

Role Gene Name Green bean; epiphytic  
⨯
RNA polymerase heat shock sigma factor SigI No genes
RNA polymerase principal sigma factor HrdA No genes
RNA polymerase principal sigma factor HrdC No genes
RNA polymerase principal sigma factor HrdD No genes
RNA polymerase sigma factor RpoD Psyr_4641 N.D.
RNA polymerase sigma factor RpoE Psyr_1217 -0.1
RNA polymerase sigma factor RpoH Psyr_4748 N.D.
RNA polymerase sigma factor RpoH-related protein No genes
RNA polymerase sigma factor RpoH-related protein RpoH2 No genes
RNA polymerase sigma factor RpoH-related protein RpoH3 No genes
RNA polymerase sigma factor RpoS Psyr_1374 +1.1
RNA polymerase sigma factor SigB No genes
RNA polymerase sigma factor SigV No genes
RNA polymerase sigma factor SigW No genes
RNA polymerase sigma factor SigZ No genes
RNA polymerase sigma factor for flagellar operon Psyr_3437 +1.8
RNA polymerase sigma-54 factor RpoN Psyr_4147 N.D.
RNA polymerase sigma-70 factor Psyr_0892 -0.2
RNA polymerase sporulation specific sigma factor SigE No genes
RNA polymerase sporulation specific sigma factor SigF No genes
RNA polymerase sporulation specific sigma factor SigG No genes
RNA polymerase sporulation specific sigma factor SigH No genes
RNA polymerase sporulation specific sigma factor SigK No genes
Serine protease precursor MucD/AlgY associated with sigma factor RpoE No genes
Sigma factor RpoE negative regulatory protein RseA Psyr_3957 N.D.
Sigma factor RpoE negative regulatory protein RseB precursor Psyr_3956 +0.1
Sigma factor RpoE regulatory protein RseC No genes

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