SEED Subsystem: Flagellum in Pseudomonas syringae pv. syringae B728a ΔmexB

Experiments:

Role Gene Name Green bean; epiphytic  
⨯
Flagellar L-ring protein FlgH Psyr_3474 +1.1
Flagellar M-ring protein FliF Psyr_3457 +1.6
Flagellar P-ring protein FlgI Psyr_3473 +0.9
Flagellar assembly protein FliH Psyr_3455 +1.9
Flagellar basal-body P-ring formation protein FlgA Psyr_3487 +1.5
Flagellar basal-body rod modification protein FlgD Psyr_3479 +1.1
Flagellar basal-body rod protein FlgB Psyr_3481 +0.8
Flagellar basal-body rod protein FlgC Psyr_3480 +0.7
Flagellar basal-body rod protein FlgF Psyr_3476 +0.4
Flagellar basal-body rod protein FlgG Psyr_3475 N.D.
Flagellar biosynthesis protein FlgN Psyr_3489 +0.3
Flagellar biosynthesis protein FlhA Psyr_3440 +1.4
Flagellar biosynthesis protein FlhB Psyr_3441 +1.7
Flagellar biosynthesis protein FlhF Psyr_3439 +0.5
Flagellar biosynthesis protein FliC No genes
Flagellar biosynthesis protein FliL Psyr_0314 -0.1
  Psyr_3448 +1.1
Flagellar biosynthesis protein FliO No genes
Flagellar biosynthesis protein FliP Psyr_3444 +1.6
Flagellar biosynthesis protein FliQ Psyr_3443 +1.9
  Psyr_3445 +1.6
Flagellar biosynthesis protein FliR Psyr_3442 +1.9
Flagellar biosynthesis protein FliS Psyr_3463 +1.4
Flagellar biosynthesis protein FliT No genes
Flagellar biosynthesis protein FliZ No genes
Flagellar hook protein FlgE Psyr_3477 -0.2
  Psyr_3478 +1.3
Flagellar hook-associated protein 3 No genes
Flagellar hook-associated protein FlgK Psyr_3471 +0.7
Flagellar hook-associated protein FlgL Psyr_3470 +0.6
Flagellar hook-associated protein FliD Psyr_3464 +0.6
Flagellar hook-basal body complex protein FliE Psyr_3458 N.D.
Flagellar hook-length control protein FliK Psyr_3449 +1.0
Flagellar motor rotation protein MotA Psyr_0561 +0.5
  Psyr_3432 -0.2
Flagellar motor rotation protein MotB Psyr_0562 +0.4
  Psyr_3431 -0.2
Flagellar motor switch protein FliG Psyr_3456 +1.4
Flagellar motor switch protein FliM Psyr_3447 +1.3
Flagellar motor switch protein FliN Psyr_3446 +2.0
Flagellar protein FlbB No genes
Flagellar protein FlbD No genes
Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) Psyr_3472 +1.0
Flagellar protein FlhE No genes
Flagellar protein FliJ Psyr_3453 +1.6
Flagellar regulatory protein FleQ Psyr_3459 +0.6
  Psyr_3461 +1.9
Flagellar sensor histidine kinase FleS Psyr_3460 +0.5
Flagellar synthesis regulator FleN Psyr_3438 N.D.
Flagellar trans-acting factor FliX No genes
Flagellar transcriptional activator FlhC No genes
Flagellar transcriptional activator FlhD No genes
Flagellin protein FlaA Psyr_3466 +0.1
Flagellin protein FlaB No genes
Flagellin protein FlaC No genes
Flagellin protein FlaD No genes
Flagellin protein FlaE No genes
Flagellin protein FlaF No genes
Flagellin protein FlaG Psyr_3465 -0.3
Flagellum-specific ATP synthase FliI Psyr_1213 -0.3
  Psyr_3454 +1.8
Negative regulator of flagellin synthesis No genes
Negative regulator of flagellin synthesis FlgM Psyr_3488 N.D.
RNA polymerase sigma factor RpoD Psyr_4641 N.D.
RNA polymerase sigma factor for flagellar operon Psyr_3437 +1.8
RNA polymerase sigma-54 factor RpoN Psyr_4147 N.D.

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