SEED Subsystem: DNA-replication in Variovorax sp. OAS795

Experiments:

Role Gene Name L-Histidine (C)  
⨯
ATP-dependent DNA helicase RecG (EC 3.6.1.-) ABID97_RS01575 -0.7
ATP-dependent DNA helicase RecQ ABID97_RS03395 +1.0
  ABID97_RS06745 -0.2
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA ABID97_RS02680 N.D.
  ABID97_RS08705 N.D.
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) ABID97_RS06275 -1.9
DNA polymerase I (EC 2.7.7.7) ABID97_RS09180 -4.3
DNA polymerase II (EC 2.7.7.7) No genes
DNA polymerase III alpha subunit (EC 2.7.7.7) ABID97_RS17985 N.D.
  ABID97_RS19215 -0.4
DNA polymerase III beta subunit (EC 2.7.7.7) ABID97_RS02685 N.D.
DNA polymerase III chi subunit (EC 2.7.7.7) ABID97_RS16575 N.D.
DNA polymerase III delta prime subunit (EC 2.7.7.7) ABID97_RS15990 N.D.
DNA polymerase III delta subunit (EC 2.7.7.7) ABID97_RS04595 N.D.
DNA polymerase III epsilon subunit (EC 2.7.7.7) ABID97_RS14035 N.D.
DNA polymerase III psi subunit (EC 2.7.7.7) No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) ABID97_RS14690 N.D.
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) ABID97_RS10540 N.D.
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN No genes
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) No genes
Helicase PriA essential for oriC/DnaA-independent DNA replication ABID97_RS05530 N.D.
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA ABID97_RS24920 -4.0
Holliday junction DNA helicase RuvB ABID97_RS24875 N.D.
Primosomal protein I No genes
Primosomal replication protein N ABID97_RS10830 N.D.
Primosomal replication protein N prime prime No genes
RecA protein ABID97_RS02275 -2.1
Recombination protein RecR ABID97_RS14700 -0.9
Replicative DNA helicase (EC 3.6.1.-) ABID97_RS10845 N.D.
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) ABID97_RS22940 -0.9
Transcription-repair coupling factor ABID97_RS17285 +0.2

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