SEED Subsystem: Flagellar motility in Pseudomonas simiae WCS417

Experiments:

Role Gene Name Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50  
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Chemotaxis protein CheV (EC 2.7.3.-) PS417_19615 -2.5
  PS417_21580 -0.2
  PS417_04725 -0.4
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY PS417_10330 -0.6
  PS417_13890 N.D.
  PS417_19690 -7.1
Flagellar L-ring protein FlgH PS417_19880 -8.8
Flagellar basal-body rod modification protein FlgD PS417_21560 -3.0
Flagellar biosynthesis protein FlhA PS417_19710 -7.6
  PS417_03460 +0.1
Flagellar biosynthesis protein FlhB PS417_19725 -7.3
Flagellar biosynthesis protein FlhF PS417_19705 -6.8
Flagellar biosynthesis protein FliR PS417_19730 -9.4
Flagellar motor rotation protein MotA PS417_19670 N.D.
  PS417_02435 -1.5
Flagellar motor rotation protein MotB PS417_19665 -7.1
  PS417_02440 -0.7
Flagellar motor switch protein FliM PS417_19755 -7.3
Flagellar motor switch protein FliN PS417_19750 N.D.
Flagellar synthesis regulator FleN PS417_19700 N.D.
Flagellin No genes
Flagellum-specific ATP synthase FliI PS417_19790 -4.2
  PS417_03470 -0.9
Motility accessory factor No genes
Motility integral membrane protein No genes
Predicted signal transduction protein PS417_07095 -0.6
  PS417_02430 -0.1
  PS417_26875 +1.3
  PS417_27875 +1.9
Putative lipoprotein required for motility No genes
RNA polymerase sigma factor for flagellar operon PS417_19695 -8.5
RNA polymerase sigma-54 factor RpoN PS417_17070 -0.6
  PS417_03450 -0.2
  PS417_04345 N.D.
Rrf2 family transcriptional regulator No genes
Signal transduction histidine kinase CheA (EC 2.7.3.-) PS417_19680 N.D.
  PS417_26650 +0.7
Signal transduction protein CetA, mediates an energy taxis response No genes
Signal transduction protein CetB, mediates an energy taxis response No genes

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