SEED Subsystem: Isoleucine degradation in Agrobacterium fabrum C58

Experiments:

Role Gene Name Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct  
⨯
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Atu0503 -1.7
3-ketoacyl-CoA thiolase (EC 2.3.1.16) Atu4823 +0.5
3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) No genes
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) No genes
Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) No genes
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4) Atu3473 -0.6
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) Atu3472 -1.5
Branched-chain amino acid aminotransferase (EC 2.6.1.42) Atu0871 +0.1
Butyrate kinase (EC 2.7.2.7) No genes
Butyryl-CoA dehydrogenase (EC 1.3.99.2) Atu3474 -1.1
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) Atu3471 -1.7
Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase (EC 1.8.1.4) No genes
Enoyl-CoA hydratase (EC 4.2.1.17) Atu0733 +0.3
  Atu1417 -1.4
Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) Atu0503 -1.7
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.-) No genes
Predicted transcriptional regulator of leucine degradation pathway, MerR family No genes
Probable acyl-CoA dehydrogenase (EC 1.3.99.3) No genes
Transcriptional regulator BkdR of isoleucine and valine catabolism operon Atu3476 +0.0
phosphotransbutyrylase (EC 2.3.1.19) No genes

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Or view this subsystem at the SEED (slow)