SEED Subsystem: Hemin transport system in Pseudomonas simiae WCS417

Experiments:

Role Gene Name Parafilmed volatile agar plate with no fungus  
⨯
ABC-type hemin transport system, ATPase component PS417_23845 +0.1
Biopolymer transport protein ExbD1 No genes
Ferric siderophore transport system, periplasmic binding protein TonB PS417_09150 -0.5
  PS417_11360 -0.3
  PS417_16050 -0.2
  PS417_26680 N.D.
  PS417_27860 N.D.
Haemin uptake system ATP-binding protein No genes
Haemin uptake system outer membrane receptor No genes
Haemin uptake system periplasmic haemin-binding protein No genes
Haemin uptake system permease protein No genes
Heme oxygenase HemO, associated with heme uptake PS417_22715 -0.2
Hemin ABC transporter, permease protein PS417_23850 +0.1
Hemin receptor protein HemR No genes
Hemin transport protein No genes
Hemin transport protein HmuS No genes
Hemin uptake protein No genes
Hemin uptake protein HemP No genes
Hemin-binding lipoprotein HbpA No genes
Iron compound ABC uptake transporter ATP-binding protein No genes
Outer membrane hemoglobin utilization protein HmbR No genes
Outer membrane hemoglobin-haptoglobin utilization protein HpuB No genes
Outer membrane receptor proteins, mostly Fe transport PS417_00540 N.D.
  PS417_02870 -1.3
Periplasmic hemin-binding protein PS417_23855 +0.3
Pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein No genes
TonB-dependent hemin , ferrichrome receptor PS417_22710 +0.1
heme uptake regulator No genes
heme uptake transmembrane sensor No genes

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