SEED Subsystem: Peptidoglycan Biosynthesis in Pseudomonas simiae WCS417

Role	Gene	Name	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	PS417_09540		+0.1
	PS417_04610		N.D.
D-alanine--D-alanine ligase (EC 6.3.2.4)	PS417_04650		-2.0
D-alanine--D-alanine ligase A (EC 6.3.2.4)	No genes
D-alanine--D-alanine ligase B (EC 6.3.2.4)	No genes
D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	PS417_20920		-0.5
	PS417_24705		-3.1
	PS417_05005		+0.1
Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	PS417_28455		N.D.
Glutamate racemase (EC 5.1.1.3)	PS417_03620		N.D.
Glutamine synthetase type I (EC 6.3.1.2)	PS417_01655		N.D.
Glutamine synthetase type II, eukaryotic (EC 6.3.1.2)	No genes
Glutamine synthetase type III, GlnN (EC 6.3.1.2)	No genes
Glutamine synthetase, clostridia type (EC 6.3.1.2)	No genes
Membrane-bound lytic murein transglycosylase B (EC 3.2.1.-)	No genes
Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-)	PS417_24680		+1.4
	PS417_24715		+0.6
Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	PS417_26790		-1.3
Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	PS417_01955		-5.5
	PS417_23825		-1.5
	PS417_28435		-0.1
Murein-DD-endopeptidase (EC 3.4.99.-)	PS417_17270		-1.1
N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	PS417_28455		N.D.
N-acetylglucosamine-1-phosphate uridyltransferase eukaryotic (EC 2.7.7.23)	No genes
Penicillin-binding protein 2 (PBP-2)	PS417_24725		N.D.
Penicillin-binding protein 4 precursor	No genes
Penicillin-binding protein PBP2a, methicillin resistance determinant MecA, transpeptidase	No genes
Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C	PS417_03025		-0.2
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	PS417_04625		N.D.
Putative glutamine synthetase, Rickettsiales type (EC 6.3.1.2)	No genes
Rare lipoprotein A precursor	PS417_24710		-8.4
Rod shape-determining protein RodA	PS417_24720		N.D.
UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	PS417_16315		N.D.
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	PS417_04405		N.D.
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	PS417_04640		N.D.
UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	PS417_04645		N.D.
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	PS417_04630		N.D.
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	PS417_04615		N.D.
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	PS417_04620		N.D.