SEED Subsystem: Photorespiration (oxidative C2 cycle) in Escherichia coli BW25113

Experiments:

Role Gene Name pinene 0.3125 vol%  
⨯
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) b0509 glxR +0.1
  b3125 garR +0.1
2-oxoglutarate/malate translocator b0770 ybhI +0.0
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) b2905 gcvT -0.0
Catalase (EC 1.11.1.6) b3942 katG +3.7
  b1732 katE +0.3
D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4) No genes
D-glycerate 3-kinase (EC 2.7.1.31), plant type No genes
Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Expressed protein possibly involved in photorespiration No genes
Glycerate kinase (EC 2.7.1.31) b0514 glxK -0.2
Glycine cleavage system H protein b2904 gcvH +0.3
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) b2903 gcvP +0.0
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) No genes
Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE b4468 glcE -0.1
Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF b4467 glcF -0.0
Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD b1687 ydiJ +0.1
  b2979 glcD -0.2
Glycolate oxidase (EC 1.1.3.15) No genes
Glycolate permease b2975 yghK -0.0
Glyoxylate carboligase (EC 4.1.1.47) b0507 gcl -0.1
Hydroxypyruvate reductase (EC 1.1.1.81) No genes
L-alanine:glyoxylate aminotransferase (EC 2.6.1.44) No genes
Malate synthase (EC 2.3.3.9) b4014 aceB -0.0
Malate synthase G (EC 2.3.3.9) b2976 glcB -0.1
Malyl-CoA lyase (EC 4.1.3.24) No genes
Phosphoglycolate phosphatase (EC 3.1.3.18) b3385 gph -0.3
Ribulose bisphosphate carboxylase (EC 4.1.1.39) No genes
Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) No genes
Ribulose bisphosphate carboxylase small chain (EC 4.1.1.39) No genes
Ribulose-1,5-bisphosphate carboxylase, Type III (EC 4.1.1.39) No genes
Serine hydroxymethyltransferase (EC 2.1.2.1) b2551 glyA N.D.
Serine--glyoxylate aminotransferase (EC 2.6.1.45) No genes

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