SEED Subsystem: DNA-binding regulatory proteins, strays in Pseudomonas putida KT2440

Experiments:

Role Gene Name benzoic (C)  
⨯
Alkanesulfonate utilization operon LysR-family regulator CbI No genes
Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family) PP_3716 -6.0
Cyn operon transcriptional activator PP_2534 -0.1
  PP_2961 +0.1
  PP_3605 +0.2
  PP_3934 -0.0
  PP_4579 -0.1
Cys regulon transcriptional activator CysB PP_1984 -0.1
  PP_2327 -5.5
  PP_2574 -0.2
  PP_2919 -0.3
GltC, transcription activator of glutamate synthase operon No genes
Hydrogen peroxide-inducible genes activator PP_4601 -0.3
  PP_4664 -0.1
  PP_5309 +0.2
LysR family transcriptional regulator PA0133 PP_0595 +0.0
LysR family transcriptional regulator PA0191 No genes
LysR family transcriptional regulator PA0739 No genes
LysR family transcriptional regulator PA1145 No genes
LysR family transcriptional regulator PA2758 PP_2250 -0.1
LysR family transcriptional regulator PA2877 No genes
LysR family transcriptional regulator PA3398 PP_1637 -0.2
LysR family transcriptional regulator PA4989 PP_4929 -0.1
LysR family transcriptional regulator PA5218 No genes
LysR family transcriptional regulator PA5437 PP_5348 +0.1
LysR family transcriptional regulator STM2281 No genes
LysR family transcriptional regulator STM3121 No genes
LysR family transcriptional regulator YbhD No genes
LysR family transcriptional regulator YcjZ No genes
LysR family transcriptional regulator YdcI No genes
LysR family transcriptional regulator YfeR No genes
LysR family transcriptional regulator YfiE No genes
LysR family transcriptional regulator YhjC No genes
LysR family transcriptional regulator YneJ PP_3152 +0.1
LysR family transcriptional regulator YnfL PP_1028 +0.0
  PP_5071 -0.0
LysR family transcriptional regulator lrhA No genes
LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase PP_3121 +0.2
Nitrogen assimilation regulatory protein Nac No genes
Transcriptional activator GpuR No genes
Transcriptional activator protein LysR PP_2078 -0.1
  PP_3779 -0.1
Transcriptional regulator GbuR PP_4522 +0.0
Xanthosine operon regulatory protein XapR, LysR family No genes

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