SEED Subsystem: Alginate metabolism in Pseudomonas putida KT2440

Experiments:

Role Gene Name 1,2-Propanediol (C)  
⨯
Alginate biosynthesis protein Alg8 PP_1287 -0.2
Alginate biosynthesis protein AlgX PP_1282 +0.1
Alginate biosynthesis transcriptional activator PP_4470 -0.5
Alginate lyase (EC 4.2.2.3) No genes
Alginate lyase precursor (EC 4.2.2.3) PP_1281 -0.1
GDP-mannose 6-dehydrogenase (EC 1.1.1.132) PP_1288 -0.2
Hexuronate transporter PP_1710 -0.1
  PP_2604 +0.1
Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) No genes
Mannose-6-phosphate isomerase (EC 5.3.1.8) PP_2071 -0.0
  PP_3568 N.D.
  PP_4860 +0.0
Pectin degradation protein KdgF No genes
Phosphomannomutase (EC 5.4.2.8) PP_1777 +0.0
  PP_5288 -0.1
Poly(beta-D-mannuronate) C5 epimerase precursor (EC 5.1.3.-) No genes
Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) PP_1280 +0.0
RNA polymerase sigma-H factor AlgT PP_1427 -1.2
alginate biosynthesis protein AlgJ No genes
alginate o-acetyltransferase AlgF No genes
outer membrane protein AlgE No genes
poly(beta-D-mannuronate) lyase (EC 4.2.2.3) No genes

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