SEED Subsystem: Glycine and Serine Utilization in Escherichia coli BL21

Experiments:

Role Gene Name Tailocin 256  
⨯
2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) ECD_03475 -0.2
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) ECD_02737 -0.5
Cystathionine beta-synthase (EC 4.2.1.22) No genes
Cystathionine gamma-lyase (EC 4.4.1.1) No genes
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) ECD_02744 +0.4
D-serine dehydratase (EC 4.3.1.18) ECD_02276 -0.1
D-serine dehydratase transcriptional activator ECD_02274 +0.9
D-serine permease DsdX ECD_02275 -0.4
D-serine/D-alanine/glycine transporter ECD_04080 +0.1
Glycerate kinase (EC 2.7.1.31) ECD_00464 -0.1
Glycine cleavage system H protein ECD_02736 +0.4
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) ECD_02735 +0.2
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) No genes
L-serine dehydratase (EC 4.3.1.17) No genes
L-serine dehydratase 1 (EC 4.3.1.17) No genes
L-serine dehydratase, alpha subunit (EC 4.3.1.17) No genes
L-serine dehydratase, beta subunit (EC 4.3.1.17) No genes
Monoamine oxidase (1.4.3.4) ECD_01358 -0.1
Phosphoserine aminotransferase (EC 2.6.1.52) ECD_00911 +0.9
Phosphoserine phosphatase (EC 3.1.3.3) ECD_04264 +0.4
Serine hydroxymethyltransferase (EC 2.1.2.1) ECD_02443 -4.7
Serine transporter ECD_02641 +1.5
  ECD_02693 +1.1
  ECD_02978 +0.2
  ECD_03390 +0.2
Seryl-tRNA synthetase (EC 6.1.1.11) ECD_00897 N.D.
Threonine dehydratase, catabolic (EC 4.3.1.19) ECD_02984 +3.4

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