SEED Subsystem: Homogentisate pathway of aromatic compound degradation in Pseudomonas simiae WCS417

Experiments:

Role Gene Name root sample 6; outgrowth in LB  
⨯
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) PS417_14005 -0.5
  PS417_24445 -0.3
Aromatic-amino-acid aminotransferase (EC 2.6.1.57) PS417_18690 +2.7
Fumarylacetoacetase (EC 3.7.1.2) PS417_05020 N.D.
Homogentisate 1,2-dioxygenase (EC 1.13.11.5) PS417_05015 -0.4
Maleylacetoacetate isomerase (EC 5.2.1.2) No genes
Possible 3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-) No genes
Transcriptional regulator, IclR family PS417_11580 N.D.
  PS417_12120 -1.9
  PS417_15475 +1.0
  PS417_18190 +0.1
  PS417_05010 +0.1

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Or view this subsystem at the SEED (slow)