SEED Subsystem: Orphan regulatory proteins in Pseudomonas putida KT2440

Role	Gene	Name	L-Arginine (C)
Acetoacetate metabolism regulatory protein AtoC	No genes
Copper sensory histidine kinase CpxA	No genes
Copper sensory histidine kinase CusS	No genes
Copper-sensing two-component system response regulator CpxR	PP_3372		+0.2
Copper-sensing two-component system response regulator CusR	PP_2158		N.D.
	PP_5383		-0.1
DNA transformation protein TfoX	No genes
Glycine cleavage system transcriptional activator	PP_0084		-0.0
	PP_1393		-1.4
	PP_5261		+0.6
Glycine cleavage system transcriptional activator GcvA	No genes
Glycine cleavage system transcriptional antiactivator GcvR	PP_1236		-0.1
Hybrid sensory histidine kinase in two-component regulatory system with EvgA	PP_2100		-0.1
Positive transcription regulator EvgA	No genes
Putative sensor-like histidine kinase YfhK	No genes
Putative sensory histidine kinase YfhA	No genes
Putative two component system histidine kinase YedV	No genes
Putative two-component response regulator and GGDEF family protein YeaJ	No genes
Putative two-component system response regulator YedW	No genes
Sensor kinase CitA, DpiB (EC 2.7.3.-)	No genes
Sensor protein basS/pmrB (EC 2.7.3.-)	No genes
Sensory histidine kinase AtoS	No genes
Sensory histidine kinase CreB	No genes
Sensory histidine kinase QseC	PP_2714		+0.1
	PP_3453		+0.0
Sensory histidine kinase in two-component regulatory system with RstA	No genes
Transcriptional regulatory protein CitB, DpiA	No genes
Transcriptional regulatory protein RstA	PP_1181		+0.2
	PP_3454		+0.2
Transcriptional regulatory protein basR/pmrA	No genes
Two-component nitrogen fixation transcriptional regulator FixJ	No genes
Two-component oxygen-sensor histidine kinase FixL	No genes
Two-component sensor histidine kinase PleC	No genes
Two-component system response regulator CreC	No genes
Two-component system response regulator QseB	PP_2347		+0.2
	PP_2713		+0.1
	PP_4225		+0.1