Metacyc Pathways for Fusobacterium nucleatum SB010

Pathway Steps Found
superpathway of fatty acids biosynthesis (E. coli) 49 / 53
superpathway of fatty acid biosynthesis II (plant) 38 / 43
palmitate biosynthesis II (type II fatty acid synthase) 29 / 31
adenosylcobalamin biosynthesis I (anaerobic) 31 / 36
superpathway of purine nucleotides de novo biosynthesis I 20 / 21
tRNA charging 20 / 21
superpathway of unsaturated fatty acids biosynthesis (E. coli) 18 / 20
homolactic fermentation 12 / 12
hexitol fermentation to lactate, formate, ethanol and acetate 17 / 19
adenosylcobalamin biosynthesis II (aerobic) 27 / 33
cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) 14 / 15
glycolysis III (from glucose) 11 / 11
oleate biosynthesis IV (anaerobic) 13 / 14
L-lysine fermentation to acetate and butanoate 10 / 10
glycolysis I (from glucose 6-phosphate) 12 / 13
superpathway of fatty acid biosynthesis I (E. coli) 14 / 16
peptidoglycan biosynthesis I (meso-diaminopimelate containing) 11 / 12
superpathway of purine nucleotides de novo biosynthesis II 21 / 26
UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) 8 / 8
superpathway of adenosylcobalamin salvage from cobinamide I 8 / 8
biotin biosynthesis I 13 / 15
glycolysis II (from fructose 6-phosphate) 10 / 11
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis 15 / 18
chorismate biosynthesis I 7 / 7
superpathway of purine nucleotide salvage 12 / 14
superpathway of L-phenylalanine biosynthesis 9 / 10
superpathway of L-tyrosine biosynthesis 9 / 10
(5Z)-dodecenoate biosynthesis I 6 / 6
(5Z)-dodecenoate biosynthesis II 6 / 6
L-histidine degradation III 6 / 6
L-threonine degradation I 6 / 6
UMP biosynthesis II 6 / 6
UMP biosynthesis III 6 / 6
adenosylcobinamide-GDP biosynthesis from cobyrinate a,c-diamide 6 / 6
phosphatidylglycerol biosynthesis I 6 / 6
phosphatidylglycerol biosynthesis II 6 / 6
ppGpp metabolism 6 / 6
superpathway of guanosine nucleotides de novo biosynthesis I 6 / 6
tetrapyrrole biosynthesis I (from glutamate) 6 / 6
gluconeogenesis I 11 / 13
superpathway of cardiolipin biosynthesis (bacteria) 11 / 13
flavin biosynthesis I (bacteria and plants) 8 / 9
lipid IVA biosynthesis (P. gingivalis) 8 / 9
methylerythritol phosphate pathway II 8 / 9
palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) 8 / 9
pyrimidine deoxyribonucleotides de novo biosynthesis I 8 / 9
superpathway of adenosylcobalamin salvage from cobinamide II 8 / 9
5-aminoimidazole ribonucleotide biosynthesis I 5 / 5
CDP-diacylglycerol biosynthesis III 5 / 5
CMP-3-deoxy-D-manno-octulosonate biosynthesis 5 / 5
D-galactose degradation I (Leloir pathway) 5 / 5
UDP-N-acetyl-D-glucosamine biosynthesis I 5 / 5
adenosylcobalamin salvage from cobalamin 5 / 5
adenosylcobinamide-GDP salvage from cobinamide I 5 / 5
chorismate biosynthesis from 3-dehydroquinate 5 / 5
ethanolamine utilization 5 / 5
inosine-5'-phosphate biosynthesis II 5 / 5
superpathway of coenzyme A biosynthesis III (mammals) 5 / 5
gluconeogenesis III 10 / 12
superpathway of phospholipid biosynthesis III (E. coli) 10 / 12
superpathway of tetrahydrofolate biosynthesis and salvage 10 / 12
superpathway of anaerobic sucrose degradation 15 / 19
L-histidine degradation VI 7 / 8
UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) 7 / 8
pyrimidine deoxyribonucleotides biosynthesis from CTP 7 / 8
superpathway of guanosine nucleotides de novo biosynthesis II 7 / 8
Bifidobacterium shunt 12 / 15
superpathway of N-acetylneuraminate degradation 17 / 22
CDP-diacylglycerol biosynthesis I 4 / 4
CDP-diacylglycerol biosynthesis II 4 / 4
L-histidine degradation I 4 / 4
biotin biosynthesis from 8-amino-7-oxononanoate I 4 / 4
biotin biosynthesis from 8-amino-7-oxononanoate II 4 / 4
coenzyme A biosynthesis I (bacteria) 4 / 4
coenzyme A biosynthesis II (eukaryotic) 4 / 4
glutaminyl-tRNAgln biosynthesis via transamidation 4 / 4
glycogen biosynthesis I (from ADP-D-Glucose) 4 / 4
gondoate biosynthesis (anaerobic) 4 / 4
guanosine ribonucleotides de novo biosynthesis 4 / 4
pyrimidine deoxyribonucleotide phosphorylation 4 / 4
pyruvate fermentation to acetate and lactate II 4 / 4
siroheme biosynthesis 4 / 4
8-amino-7-oxononanoate biosynthesis I 9 / 11
O-antigen building blocks biosynthesis (E. coli) 9 / 11
pyrimidine deoxyribonucleotides de novo biosynthesis IV 6 / 7
2-methyladeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 3 / 3
5-hydroxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 3 / 3
5-methoxy-6-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 3 / 3
5-methoxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 3 / 3
5-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 3 / 3
D-galactose detoxification 3 / 3
D-serine degradation 3 / 3
L-methionine degradation II 3 / 3
L-serine degradation 3 / 3
L-tryptophan degradation II (via pyruvate) 3 / 3
adeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 3 / 3
adenosine ribonucleotides de novo biosynthesis 3 / 3
adenosylcobalamin biosynthesis from adenosylcobinamide-GDP I 3 / 3
benzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 3 / 3
cardiolipin biosynthesis II 3 / 3
fatty acid biosynthesis initiation (type II) 3 / 3
formate assimilation into 5,10-methylenetetrahydrofolate 3 / 3
pentose phosphate pathway (partial) 3 / 3
phytyl diphosphate biosynthesis 3 / 3
pyruvate fermentation to acetate I 3 / 3
pyruvate fermentation to acetate IV 3 / 3
pyruvate fermentation to acetate VII 3 / 3
pyruvate fermentation to ethanol I 3 / 3
pyruvate fermentation to ethanol III 3 / 3
tetrahydrofolate biosynthesis I 3 / 3
glycolysis IV 8 / 10
superpathway of tetrahydrofolate biosynthesis 8 / 10
superpathway of thiamine diphosphate biosynthesis I 8 / 10
superpathway of (Kdo)2-lipid A biosynthesis 13 / 17
5-oxo-L-proline metabolism 5 / 6
NAD de novo biosynthesis I 5 / 6
UMP biosynthesis I 5 / 6
adenosylcobinamide-GDP salvage from cobinamide II 5 / 6
autoinducer AI-2 biosynthesis II (Vibrio) 5 / 6
biotin biosynthesis II 5 / 6
inosine-5'-phosphate biosynthesis I 5 / 6
lipid IVA biosynthesis (E. coli) 5 / 6
lipid IVA biosynthesis (H. pylori) 5 / 6
lipid IVA biosynthesis (P. putida) 5 / 6
lipid IVA biosynthesis (Vibrio cholerae serogroup O1 El Tor) 5 / 6
lipid IVA biosynthesis (generic) 5 / 6
pentose phosphate pathway (non-oxidative branch) II 5 / 6
stearate biosynthesis II (bacteria and plants) 5 / 6
superpathway of 5-aminoimidazole ribonucleotide biosynthesis 5 / 6
thiazole component of thiamine diphosphate biosynthesis I 5 / 6
cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation) 10 / 13
3-dehydroquinate biosynthesis I 2 / 2
4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis I 2 / 2
4-aminobenzoate biosynthesis I 2 / 2
4-aminobenzoate biosynthesis II 2 / 2
N-acetylglucosamine degradation I 2 / 2
trans, trans-farnesyl diphosphate biosynthesis 2 / 2
CMP phosphorylation 2 / 2
Kdo transfer to lipid IVA (Brucella) 2 / 2
Kdo transfer to lipid IVA (E. coli) 2 / 2
Kdo transfer to lipid IVA (H. pylori) 2 / 2
Kdo transfer to lipid IVA (P. gingivalis) 2 / 2
Kdo transfer to lipid IVA (P. putida) 2 / 2
Kdo transfer to lipid IVA (generic) 2 / 2
L-threonine degradation IV 2 / 2
UDP-α-D-glucose biosynthesis 2 / 2
acetate and ATP formation from acetyl-CoA I 2 / 2
acetoacetate degradation (to acetyl CoA) 2 / 2
adenine and adenosine salvage I 2 / 2
citrate degradation 2 / 2
di-trans,poly-cis-undecaprenyl phosphate biosynthesis 2 / 2
ethanol degradation I 2 / 2
flavin salvage 2 / 2
glycerol-3-phosphate shuttle 2 / 2
glycerophosphodiester degradation 2 / 2
guanine and guanosine salvage I 2 / 2
guanosine deoxyribonucleotides de novo biosynthesis I 2 / 2
hydroxymethylpyrimidine salvage 2 / 2
indole-3-acetate activation I 2 / 2
malate/L-aspartate shuttle pathway 2 / 2
menaquinol-10 biosynthesis 2 / 2
menaquinol-11 biosynthesis 2 / 2
menaquinol-12 biosynthesis 2 / 2
menaquinol-13 biosynthesis 2 / 2
menaquinol-7 biosynthesis 2 / 2
phosphatidylserine and phosphatidylethanolamine biosynthesis I 2 / 2
putrescine biosynthesis III 2 / 2
reductive monocarboxylic acid cycle 2 / 2
sedoheptulose bisphosphate bypass 2 / 2
tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate 2 / 2
xanthine and xanthosine salvage 2 / 2
flavin biosynthesis III (fungi) 7 / 9
pyrimidine deoxyribonucleotides de novo biosynthesis III 7 / 9
sucrose biosynthesis I (from photosynthesis) 7 / 9
superpathway of Clostridium acetobutylicum acidogenic fermentation 7 / 9
superpathway of fermentation (Chlamydomonas reinhardtii) 7 / 9
superpathway of pyrimidine ribonucleotides de novo biosynthesis 7 / 9
(S)-propane-1,2-diol degradation 4 / 5
5-aminoimidazole ribonucleotide biosynthesis II 4 / 5
8-amino-7-oxononanoate biosynthesis IV 4 / 5
cis-vaccenate biosynthesis 4 / 5
ADP-L-glycero-β-D-manno-heptose biosynthesis 4 / 5
acetylene degradation (anaerobic) 4 / 5
autoinducer AI-2 biosynthesis I 4 / 5
dTDP-β-L-rhamnose biosynthesis 4 / 5
fatty acid elongation -- saturated 4 / 5
folate polyglutamylation 4 / 5
pentose phosphate pathway (non-oxidative branch) I 4 / 5
polyisoprenoid biosynthesis (E. coli) 4 / 5
pyruvate fermentation to acetone 4 / 5
superpathway of adenosine nucleotides de novo biosynthesis I 4 / 5
superpathway of fatty acid biosynthesis initiation 4 / 5
formaldehyde assimilation III (dihydroxyacetone cycle) 9 / 12
octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 9 / 12
superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP) 9 / 12
3-(4-hydroxyphenyl)pyruvate biosynthesis 1 / 1
5-hydroxybenzimidazole biosynthesis (anaerobic) 1 / 1
S-methyl-5'-thioadenosine degradation IV 1 / 1
D-sorbitol degradation II 1 / 1
L-alanine biosynthesis III 1 / 1
L-asparagine biosynthesis II 1 / 1
L-asparagine degradation I 1 / 1
L-aspartate biosynthesis 1 / 1
L-aspartate degradation I 1 / 1
L-cysteine degradation IV 1 / 1
L-glutamate degradation I 1 / 1
L-glutamate degradation IX (via 4-aminobutanoate) 1 / 1
L-glutamine biosynthesis I 1 / 1
L-glutamine degradation I 1 / 1
L-malate degradation I 1 / 1
L-malate degradation II 1 / 1
NADP biosynthesis 1 / 1
PRPP biosynthesis 1 / 1
S-adenosyl-L-methionine biosynthesis 1 / 1
UDP-α-D-galactose biosynthesis 1 / 1
UDP-α-D-glucuronate biosynthesis (from UDP-glucose) 1 / 1
UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) 1 / 1
UDP-N-acetyl-D-galactosamine biosynthesis I 1 / 1
acetaldehyde biosynthesis I 1 / 1
acyl carrier protein activation 1 / 1
alanine racemization 1 / 1
arginine dependent acid resistance 1 / 1
cadaverine biosynthesis 1 / 1
demethylmenaquinol-4 biosynthesis 1 / 1
demethylmenaquinol-6 biosynthesis I 1 / 1
demethylmenaquinol-8 biosynthesis I 1 / 1
demethylmenaquinol-9 biosynthesis 1 / 1
fructose degradation 1 / 1
geranyl diphosphate biosynthesis 1 / 1
geranylgeranyl diphosphate biosynthesis 1 / 1
glycine biosynthesis IV 1 / 1
heptaprenyl diphosphate biosynthesis 1 / 1
long-chain fatty acid activation 1 / 1
menaquinol-4 biosynthesis I 1 / 1
menaquinol-6 biosynthesis 1 / 1
menaquinol-8 biosynthesis 1 / 1
menaquinol-9 biosynthesis 1 / 1
plasmalogen biosynthesis II (anaerobic) 1 / 1
pyridoxal 5'-phosphate biosynthesis II 1 / 1
pyrimidine nucleobases salvage I 1 / 1
pyruvate decarboxylation to acetyl CoA III 1 / 1
pyruvate fermentation to (R)-lactate 1 / 1
pyruvate fermentation to (S)-lactate 1 / 1
sulfoacetaldehyde degradation III 1 / 1
sulfur reduction III 1 / 1
thiamine diphosphate salvage III 1 / 1
triclosan resistance 1 / 1
UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-diaminopimelate containing) 6 / 8
glycogen degradation I 6 / 8
sucrose biosynthesis II 6 / 8
peptidoglycan biosynthesis III (mycobacteria) 11 / 15
palmitate biosynthesis III 21 / 29
S-adenosyl-L-methionine salvage I 3 / 4
GDP-mannose biosynthesis 3 / 4
L-asparagine biosynthesis III (tRNA-dependent) 3 / 4
NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde 3 / 4
adenine and adenosine salvage III 3 / 4
biotin-carboxyl carrier protein assembly 3 / 4
cardiolipin and phosphatidylethanolamine biosynthesis (Xanthomonas) 3 / 4
coenzyme A biosynthesis III (archaea) 3 / 4
dipyrromethane cofactor biosynthesis 3 / 4
formaldehyde oxidation VII (THF pathway) 3 / 4
glycerol and glycerophosphodiester degradation 3 / 4
guanosine deoxyribonucleotides de novo biosynthesis II 3 / 4
purine deoxyribonucleosides degradation I 3 / 4
pyruvate fermentation to acetate and (S)-lactate I 3 / 4
starch degradation V 3 / 4
superpathway of L-aspartate and L-asparagine biosynthesis 3 / 4
superpathway of putrescine biosynthesis 3 / 4
superpathway of pyrimidine nucleobases salvage 3 / 4
tetrapyrrole biosynthesis II (from glycine) 3 / 4
glycolysis VI (from fructose) 8 / 11
pyruvate fermentation to hexanol (engineered) 8 / 11
superpathway of thiamine diphosphate biosynthesis II 8 / 11
heterolactic fermentation 13 / 18
superpathway of hexitol degradation (bacteria) 13 / 18
CMP-8-amino-3,8-dideoxy-D-manno-octulosonate biosynthesis 5 / 7
UDP-N-acetyl-D-galactosamine biosynthesis II 5 / 7
acetyl-CoA fermentation to butanoate 5 / 7
pyruvate fermentation to butanoate 5 / 7
stachyose degradation 5 / 7
superpathway of adenosine nucleotides de novo biosynthesis II 5 / 7
thiazole component of thiamine diphosphate biosynthesis II 5 / 7
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) 10 / 14
β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation 2 / 3
4-methylphenyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 2 / 3
6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium) 2 / 3
N-acetylglucosamine degradation II 2 / 3
GDP-α-D-glucose biosynthesis 2 / 3
L-alanine degradation II (to D-lactate) 2 / 3
L-asparagine degradation III (mammalian) 2 / 3
L-citrulline degradation 2 / 3
L-cysteine degradation II 2 / 3
L-phenylalanine biosynthesis I 2 / 3
L-serine biosynthesis I 2 / 3
L-tyrosine biosynthesis I 2 / 3
UTP and CTP de novo biosynthesis 2 / 3
adenine salvage 2 / 3
ammonia assimilation cycle III 2 / 3
benzoyl-CoA biosynthesis 2 / 3
cardiolipin biosynthesis I 2 / 3
cardiolipin biosynthesis III 2 / 3
dTMP de novo biosynthesis (mitochondrial) 2 / 3
gallate biosynthesis 2 / 3
glycerol degradation I 2 / 3
ketolysis 2 / 3
methylglyoxal degradation I 2 / 3
methylglyoxal degradation V 2 / 3
methylglyoxal degradation VIII 2 / 3
oleate biosynthesis III (cyanobacteria) 2 / 3
ophiobolin F biosynthesis 2 / 3
phenyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 2 / 3
purine deoxyribonucleosides degradation II 2 / 3
pyruvate fermentation to acetate II 2 / 3
scopoletin biosynthesis 2 / 3
seleno-amino acid detoxification and volatilization III 2 / 3
superpathway of acetate utilization and formation 2 / 3
superpathway of guanine and guanosine salvage 2 / 3
tetrahydrofolate biosynthesis II 2 / 3
thiamine diphosphate biosynthesis III (Staphylococcus) 2 / 3
thiamine diphosphate biosynthesis IV (eukaryotes) 2 / 3
trehalose degradation V 2 / 3
urea degradation I 2 / 3
L-glutamate degradation V (via hydroxyglutarate) 7 / 10
Rubisco shunt 7 / 10
peptidoglycan biosynthesis II (staphylococci) 12 / 17
peptidoglycan biosynthesis IV (Enterococcus faecium) 12 / 17
superpathway of glycolysis and the Entner-Doudoroff pathway 12 / 17
NAD de novo biosynthesis III 4 / 6
NAD de novo biosynthesis IV (anaerobic) 4 / 6
UDP-N-acetyl-D-glucosamine biosynthesis II 4 / 6
glycogen degradation II 4 / 6
inosine-5'-phosphate biosynthesis III 4 / 6
lipid IVA biosynthesis (2,3-diamino-2,3-dideoxy-D-glucopyranose-containing) 4 / 6
purine ribonucleosides degradation 4 / 6
pyruvate fermentation to butanol II (engineered) 4 / 6
stearate biosynthesis IV 4 / 6
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis 4 / 6
Calvin-Benson-Bassham cycle 9 / 13
superpathway of Clostridium acetobutylicum solventogenic fermentation 9 / 13
taxadiene biosynthesis (engineered) 9 / 13
γ-linolenate biosynthesis II (animals) 1 / 2
(3R)-linalool biosynthesis 1 / 2
(3S)-linalool biosynthesis 1 / 2
(Kdo)2-lipid A biosynthesis (E. coli) 1 / 2
3-oxoadipate degradation 1 / 2
5-methoxybenzimidazole biosynthesis (anaerobic) 1 / 2
8-amino-7-oxononanoate biosynthesis II 1 / 2
8-amino-7-oxononanoate biosynthesis III 1 / 2
S-methyl-5'-thioadenosine degradation I 1 / 2
D-mannose degradation I 1 / 2
D-mannose degradation II 1 / 2
Kdo transfer to lipid IVA (Haemophilus) 1 / 2
Kdo transfer to lipid IVA (Vibrio cholerae serogroup O1 El Tor) 1 / 2
L-alanine degradation I 1 / 2
L-alanine degradation V (oxidative Stickland reaction) 1 / 2
L-arginine degradation III (arginine decarboxylase/agmatinase pathway) 1 / 2
L-arginine degradation VII (arginase 3 pathway) 1 / 2
L-canavanine degradation I 1 / 2
L-cysteine biosynthesis I 1 / 2
L-glutamate biosynthesis I 1 / 2
L-glutamate degradation II 1 / 2
L-histidine degradation V 1 / 2
L-lactaldehyde degradation (aerobic) 1 / 2
L-phenylalanine biosynthesis III (cytosolic, plants) 1 / 2
L-sorbose degradation 1 / 2
L-threonine biosynthesis 1 / 2
L-threonine degradation V 1 / 2
L-tryptophan degradation IV (via indole-3-lactate) 1 / 2
L-tyrosine degradation II 1 / 2
NAD phosphorylation and transhydrogenation 1 / 2
UDP-α-D-galactofuranose biosynthesis 1 / 2
UDP-α-D-xylose biosynthesis 1 / 2
UDP-N-acetyl-α-D-galactosaminuronate biosynthesis 1 / 2
acyl carrier protein metabolism 1 / 2
adenine and adenosine salvage II 1 / 2
adenosine deoxyribonucleotides de novo biosynthesis I 1 / 2
adenosylcobinamide-GDP salvage from assorted adenosylcobamides 1 / 2
alkylnitronates degradation 1 / 2
aminopropanol phosphate biosynthesis I 1 / 2
ammonia assimilation cycle I 1 / 2
ammonia assimilation cycle II 1 / 2
arsenate detoxification III 1 / 2
atromentin biosynthesis 1 / 2
cytidylyl molybdenum cofactor sulfurylation 1 / 2
dimethyl sulfide biosynthesis from methionine 1 / 2
glycerol 3-phosphate to cytochrome aa3 oxidase electron transfer 1 / 2
glycerol degradation III 1 / 2
glycerol degradation V 1 / 2
glycerol-3-phosphate to cytochrome bo oxidase electron transfer 1 / 2
glycerol-3-phosphate to fumarate electron transfer 1 / 2
glycerol-3-phosphate to hydrogen peroxide electron transport 1 / 2
glycine degradation (reductive Stickland reaction) 1 / 2
guanine and guanosine salvage II 1 / 2
linalool biosynthesis I 1 / 2
linoleate biosynthesis II (animals) 1 / 2
malonate decarboxylase activation 1 / 2
nitrate reduction IX (dissimilatory) 1 / 2
palmitoleate biosynthesis III (cyanobacteria) 1 / 2
periplasmic disulfide bond reduction 1 / 2
phenylmercury acetate degradation 1 / 2
phosphatidylcholine resynthesis via glycerophosphocholine 1 / 2
phospholipid remodeling (phosphatidate, yeast) 1 / 2
polyphosphate metabolism 1 / 2
pseudouridine degradation 1 / 2
putrescine biosynthesis I 1 / 2
pyrimidine nucleobases salvage II 1 / 2
pyruvate fermentation to acetate III 1 / 2
pyruvate fermentation to acetate VIII 1 / 2
pyruvate fermentation to ethanol II 1 / 2
seleno-amino acid detoxification and volatilization I 1 / 2
sulfoacetaldehyde degradation I 1 / 2
superpathway of L-asparagine biosynthesis 1 / 2
thiamine diphosphate biosynthesis I (E. coli) 1 / 2
thiamine diphosphate biosynthesis II (Bacillus) 1 / 2
thioredoxin pathway 1 / 2
trehalose degradation I (low osmolarity) 1 / 2
trehalose degradation II (cytosolic) 1 / 2
trehalose degradation VI (periplasmic) 1 / 2
1,3-propanediol biosynthesis (engineered) 6 / 9
folate transformations III (E. coli) 6 / 9
formaldehyde assimilation II (assimilatory RuMP Cycle) 6 / 9
methylerythritol phosphate pathway I 6 / 9
glycerol degradation to butanol 11 / 16
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I 3 / 5
6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) 3 / 5
L-histidine degradation II 3 / 5
NAD salvage pathway II (PNC IV cycle) 3 / 5
biotin biosynthesis from 8-amino-7-oxononanoate III 3 / 5
chlorophyll a biosynthesis II 3 / 5
citrate lyase activation 3 / 5
cyanuric acid degradation II 3 / 5
glucose and glucose-1-phosphate degradation 3 / 5
glucosylglycerol biosynthesis 3 / 5
glutaryl-CoA degradation 3 / 5
isopropanol biosynthesis (engineered) 3 / 5
phosphatidate biosynthesis (yeast) 3 / 5
queuosine biosynthesis III (queuosine salvage) 3 / 5
sucrose degradation II (sucrose synthase) 3 / 5
thiamine diphosphate salvage II 3 / 5
lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales) 5 / 8
pyruvate fermentation to butanol I 5 / 8
(2S)-ethylmalonyl-CoA biosynthesis 2 / 4
S-(2-succinyl)-L-cysteine degradation 2 / 4
all-trans-farnesol biosynthesis 2 / 4
D-galactosamine and N-acetyl-D-galactosamine degradation 2 / 4
L-arginine degradation V (arginine deiminase pathway) 2 / 4
L-arginine degradation VI (arginase 2 pathway) 2 / 4
L-phenylalanine degradation III 2 / 4
L-tyrosine degradation III 2 / 4
adenosine deoxyribonucleotides de novo biosynthesis II 2 / 4
adenosylcobalamin biosynthesis from adenosylcobinamide-GDP II 2 / 4
cytidine-5'-diphosphate-glycerol biosynthesis 2 / 4
fatty acid biosynthesis initiation (mitochondria) 2 / 4
inosine 5'-phosphate degradation 2 / 4
mannitol degradation II 2 / 4
methyl phomopsenoate biosynthesis 2 / 4
phytol degradation 2 / 4
queuosine biosynthesis I (de novo) 2 / 4
reactive oxygen species degradation 2 / 4
starch degradation III 2 / 4
sucrose degradation III (sucrose invertase) 2 / 4
sucrose degradation IV (sucrose phosphorylase) 2 / 4
superpathway of L-serine and glycine biosynthesis I 2 / 4
colanic acid building blocks biosynthesis 7 / 11
folate transformations II (plants) 7 / 11
tetradecanoate biosynthesis (mitochondria) 17 / 25
L-glutamate degradation XI (reductive Stickland reaction) 4 / 7
NAD salvage pathway I (PNC VI cycle) 4 / 7
anaerobic energy metabolism (invertebrates, cytosol) 4 / 7
pyridoxal 5'-phosphate biosynthesis I 4 / 7
pyrimidine deoxyribonucleotides de novo biosynthesis II 4 / 7
superpathway of purine deoxyribonucleosides degradation 4 / 7
superpathway of thiamine diphosphate biosynthesis III (eukaryotes) 4 / 7
thiamine diphosphate salvage IV (yeast) 4 / 7
(R)-cysteate degradation 1 / 3
1-(sn-glycero-1-phospho)-1D-myo-inositol biosynthesis 1 / 3
1-(sn-glycero-3-phospho)-1D-myo-inositol biosynthesis 1 / 3
2-aminoethylphosphonate degradation I 1 / 3
2-deoxy-α-D-ribose 1-phosphate degradation 1 / 3
2-deoxy-D-ribose degradation I 1 / 3
2-hydroxypenta-2,4-dienoate degradation 1 / 3
2-oxoglutarate decarboxylation to succinyl-CoA 1 / 3
2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1 / 3
5,6-dimethylbenzimidazole biosynthesis I (aerobic) 1 / 3
5-methoxy-6-methylbenzimidazole biosynthesis (anaerobic) 1 / 3
S-adenosyl-L-methionine salvage II 1 / 3
bis(guanylyl molybdopterin) cofactor sulfurylation 1 / 3
sn-glycerol 3-phosphate anaerobic respiration 1 / 3
D-allose degradation 1 / 3
D-sorbitol biosynthesis I 1 / 3
D-tagatose degradation 1 / 3
L-arginine degradation I (arginase pathway) 1 / 3
L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway) 1 / 3
L-aspartate degradation II (aerobic) 1 / 3
L-aspartate degradation III (anaerobic) 1 / 3
L-carnitine degradation II 1 / 3
L-cysteine biosynthesis IX (Trichomonas vaginalis) 1 / 3
L-homoserine biosynthesis 1 / 3
L-isoleucine degradation II 1 / 3
L-leucine degradation III 1 / 3
L-methionine degradation I (to L-homocysteine) 1 / 3
L-methionine degradation III 1 / 3
L-methionine salvage from L-homocysteine 1 / 3
L-phenylalanine degradation II (anaerobic) 1 / 3
L-selenocysteine biosynthesis I (bacteria) 1 / 3
L-tyrosine degradation IV (to 4-methylphenol) 1 / 3
L-valine degradation II 1 / 3
NAD phosphorylation and dephosphorylation 1 / 3
NAD salvage pathway III (to nicotinamide riboside) 1 / 3
adenine and adenosine salvage V 1 / 3
alkane biosynthesis II 1 / 3
aminopropylcadaverine biosynthesis 1 / 3
cyanate degradation 1 / 3
ethanol degradation II 1 / 3
ethene biosynthesis I (plants) 1 / 3
ethene biosynthesis IV (engineered) 1 / 3
fatty acid biosynthesis initiation (type I) 1 / 3
glutathione-peroxide redox reactions 1 / 3
glycine biosynthesis II 1 / 3
glycine cleavage 1 / 3
glycine degradation 1 / 3
indole-3-acetate biosynthesis VI (bacteria) 1 / 3
mannitol biosynthesis 1 / 3
methylglyoxal degradation IV 1 / 3
oleate biosynthesis I (plants) 1 / 3
phosphopantothenate biosynthesis II 1 / 3
plaunotol biosynthesis 1 / 3
polyhydroxybutanoate biosynthesis 1 / 3
propanoyl CoA degradation I 1 / 3
putrescine biosynthesis II 1 / 3
pyrimidine deoxyribonucleosides degradation 1 / 3
pyrimidine deoxyribonucleotides dephosphorylation 1 / 3
pyruvate decarboxylation to acetyl CoA I 1 / 3
pyruvate fermentation to acetate VI 1 / 3
pyruvate fermentation to acetate and alanine 1 / 3
quinate degradation I 1 / 3
quinate degradation II 1 / 3
sucrose biosynthesis III 1 / 3
sulfoacetaldehyde degradation IV 1 / 3
sulfolactate degradation III 1 / 3
superpathway of ammonia assimilation (plants) 1 / 3
superpathway of linalool biosynthesis 1 / 3
thiamine diphosphate salvage V 1 / 3
trehalose degradation IV 1 / 3
triacylglycerol degradation 1 / 3
vancomycin resistance I 1 / 3
5,6-dehydrokavain biosynthesis (engineered) 6 / 10
glycolysis V (Pyrococcus) 6 / 10
isoprene biosynthesis I 6 / 10
starch biosynthesis 6 / 10
superpathway of heme b biosynthesis from glutamate 6 / 10
peptidoglycan biosynthesis V (β-lactam resistance) 11 / 17
superpathway of Clostridium acetobutylicum acidogenic and solventogenic fermentation 11 / 17
superpathway of glucose and xylose degradation 11 / 17
L-methionine biosynthesis II 3 / 6
fatty acid salvage 3 / 6
purine deoxyribonucleosides salvage 3 / 6
superpathway of L-threonine biosynthesis 3 / 6
superpathway of L-tryptophan biosynthesis 8 / 13
anteiso-branched-chain fatty acid biosynthesis 23 / 34
even iso-branched-chain fatty acid biosynthesis 23 / 34
odd iso-branched-chain fatty acid biosynthesis 23 / 34
Entner-Doudoroff pathway I 5 / 9
chitin biosynthesis 5 / 9
reductive glycine pathway of autotrophic CO2 fixation 5 / 9
superpathway of coenzyme A biosynthesis I (bacteria) 5 / 9
superpathway of pyrimidine deoxyribonucleoside salvage 5 / 9
valproate β-oxidation 5 / 9
(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered) 2 / 5
1,5-anhydrofructose degradation 2 / 5
4-hydroxy-2(1H)-quinolone biosynthesis 2 / 5
4-hydroxybenzoate biosynthesis III (plants) 2 / 5
N-(1-deoxy-D-fructos-1-yl)-L-asparagine degradation 2 / 5
N-acetyl-D-galactosamine degradation 2 / 5
trans-4-hydroxy-L-proline degradation I 2 / 5
Kdo transfer to lipid IVA (Chlamydia) 2 / 5
NAD salvage pathway V (PNC V cycle) 2 / 5
cyanuric acid degradation I 2 / 5
cytosolic NADPH production (yeast) 2 / 5
dTDP-4-O-demethyl-β-L-noviose biosynthesis 2 / 5
dZTP biosynthesis 2 / 5
fatty acid β-oxidation II (plant peroxisome) 2 / 5
felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis 2 / 5
galactitol degradation 2 / 5
lactate biosynthesis (archaea) 2 / 5
sucrose degradation V (sucrose α-glucosidase) 2 / 5
uracil degradation III 2 / 5
L-mimosine degradation 4 / 8
cobalamin salvage (eukaryotic) 4 / 8
glycine betaine degradation I 4 / 8
pentose phosphate pathway 4 / 8
stellatic acid biosynthesis 4 / 8
superpathway of polyamine biosynthesis I 4 / 8
thiamine diphosphate formation from pyrithiamine and oxythiamine (yeast) 4 / 8
1,2-dichloroethane degradation 1 / 4
2'-deoxymugineic acid phytosiderophore biosynthesis 1 / 4
2-oxobutanoate degradation I 1 / 4
5'-deoxyadenosine degradation II 1 / 4
5,6-dimethylbenzimidazole biosynthesis II (anaerobic) 1 / 4
6-hydroxymethyl-dihydropterin diphosphate biosynthesis V (Pyrococcus) 1 / 4
7-(3-amino-3-carboxypropyl)-wyosine biosynthesis 1 / 4
erythro-tetrahydrobiopterin biosynthesis I 1 / 4
threo-tetrahydrobiopterin biosynthesis 1 / 4
GABA shunt I 1 / 4
GABA shunt II 1 / 4
GDP-D-glycero-α-D-manno-heptose biosynthesis 1 / 4
L-glutamate degradation VI (to pyruvate) 1 / 4
L-methionine biosynthesis III 1 / 4
L-phenylalanine biosynthesis II 1 / 4
L-selenocysteine biosynthesis II (archaea and eukaryotes) 1 / 4
L-serine biosynthesis II 1 / 4
L-tryptophan degradation VIII (to tryptophol) 1 / 4
L-tyrosine biosynthesis II 1 / 4
L-tyrosine biosynthesis III 1 / 4
acridone alkaloid biosynthesis 1 / 4
arsenic detoxification (bacteria) 1 / 4
chitin deacetylation 1 / 4
creatinine degradation I 1 / 4
dTDP-β-D-fucofuranose biosynthesis 1 / 4
dTDP-6-deoxy-α-D-allose biosynthesis 1 / 4
dTDP-N-acetylthomosamine biosynthesis 1 / 4
dTDP-N-acetylviosamine biosynthesis 1 / 4
fatty acid biosynthesis initiation (plant mitochondria) 1 / 4
glycogen biosynthesis II (from UDP-D-Glucose) 1 / 4
guanosine nucleotides degradation III 1 / 4
ipsdienol biosynthesis 1 / 4
long chain fatty acid ester synthesis (engineered) 1 / 4
methylwyosine biosynthesis 1 / 4
phenol degradation II (anaerobic) 1 / 4
phosphatidylcholine acyl editing 1 / 4
phospholipid remodeling (phosphatidylethanolamine, yeast) 1 / 4
phosphopantothenate biosynthesis I 1 / 4
preQ0 biosynthesis 1 / 4
protocatechuate degradation II (ortho-cleavage pathway) 1 / 4
salidroside biosynthesis 1 / 4
spermidine biosynthesis III 1 / 4
sulfolactate degradation II 1 / 4
superpathway of L-alanine biosynthesis 1 / 4
superpathway of glycerol degradation to 1,3-propanediol 1 / 4
superpathway of tetrathionate reduction (Salmonella typhimurium) 1 / 4
tRNA-uridine 2-thiolation (mammalian mitochondria) 1 / 4
tRNA-uridine 2-thiolation (yeast mitochondria) 1 / 4
taurine biosynthesis II 1 / 4
tetrahydromonapterin biosynthesis 1 / 4
wax esters biosynthesis II 1 / 4
superpathway of aromatic amino acid biosynthesis 11 / 18
4-aminobutanoate degradation V 3 / 7
L-cysteine biosynthesis VI (reverse transsulfuration) 3 / 7
L-isoleucine biosynthesis I (from threonine) 3 / 7
drosopterin and aurodrosopterin biosynthesis 3 / 7
factor 430 biosynthesis 3 / 7
glycine betaine degradation III 3 / 7
incomplete reductive TCA cycle 3 / 7
succinate fermentation to butanoate 3 / 7
toxoflavin biosynthesis 3 / 7
flavin biosynthesis II (archaea) 5 / 10
superpathway of pyrimidine ribonucleosides salvage 5 / 10
3-methyl-branched fatty acid α-oxidation 2 / 6
TCA cycle VIII (Chlamydia) 2 / 6
UDP-N-acetyl-D-galactosamine biosynthesis III 2 / 6
arsenate detoxification I 2 / 6
arsenic detoxification (plants) 2 / 6
bisabolene biosynthesis (engineered) 2 / 6
dTDP-L-daunosamine biosynthesis 2 / 6
dTDP-sibirosamine biosynthesis 2 / 6
methanogenesis from acetate 2 / 6
methyl ketone biosynthesis (engineered) 2 / 6
methylgallate degradation 2 / 6
palmitoyl ethanolamide biosynthesis 2 / 6
petroselinate biosynthesis 2 / 6
pyridoxal 5'-phosphate salvage I 2 / 6
superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation 2 / 6
superpathway of allantoin degradation in yeast 2 / 6
superpathway of pyrimidine deoxyribonucleosides degradation 2 / 6
superpathway of stearidonate biosynthesis (cyanobacteria) 2 / 6
superpathway of sulfolactate degradation 2 / 6
(S)-lactate fermentation to propanoate, acetate and hydrogen 7 / 13
Entner-Doudoroff pathway II (non-phosphorylative) 4 / 9
Entner-Doudoroff pathway III (semi-phosphorylative) 4 / 9
superpathway of L-alanine fermentation (Stickland reaction) 4 / 9
4-hydroxybenzoate biosynthesis I (eukaryotes) 1 / 5
myo-inositol degradation II 1 / 5
S-benzyl-L-cysteine degradation 1 / 5
cis-zeatin biosynthesis 1 / 5
CDP-6-deoxy-D-gulose biosynthesis 1 / 5
D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1 / 5
L-methionine biosynthesis I 1 / 5
L-ornithine biosynthesis I 1 / 5
L-phenylalanine degradation VI (reductive Stickland reaction) 1 / 5
L-tryptophan degradation XIII (reductive Stickland reaction) 1 / 5
L-tyrosine degradation I 1 / 5
L-tyrosine degradation V (reductive Stickland reaction) 1 / 5
UDP-2,3-diacetamido-2,3-dideoxy-α-D-mannuronate biosynthesis 1 / 5
adenosine nucleotides degradation II 1 / 5
adipate biosynthesis 1 / 5
adipate degradation 1 / 5
bisucaberin biosynthesis 1 / 5
catechol degradation I (meta-cleavage pathway) 1 / 5
creatinine degradation II 1 / 5
dTDP-α-D-mycaminose biosynthesis 1 / 5
dTDP-3-acetamido-α-D-fucose biosynthesis 1 / 5
dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis 1 / 5
desferrioxamine B biosynthesis 1 / 5
desferrioxamine E biosynthesis 1 / 5
dissimilatory sulfate reduction I (to hydrogen sufide)) 1 / 5
ethylbenzene degradation (anaerobic) 1 / 5
fatty acid β-oxidation VII (yeast peroxisome) 1 / 5
ketogenesis 1 / 5
lactose degradation I 1 / 5
lupanine biosynthesis 1 / 5
mitochondrial NADPH production (yeast) 1 / 5
mono-trans, poly-cis decaprenyl phosphate biosynthesis 1 / 5
octane oxidation 1 / 5
phenylethanol biosynthesis 1 / 5
protein O-mannosylation II (mammals, core M1 and core M2) 1 / 5
protein O-mannosylation III (mammals, core M3) 1 / 5
pyrimidine deoxyribonucleosides salvage 1 / 5
pyruvate fermentation to isobutanol (engineered) 1 / 5
seleno-amino acid biosynthesis (plants) 1 / 5
superpathway of L-cysteine biosynthesis (mammalian) 1 / 5
superpathway of L-phenylalanine and L-tyrosine biosynthesis 1 / 5
superpathway of plastoquinol biosynthesis 1 / 5
tRNA-uridine 2-thiolation (thermophilic bacteria) 1 / 5
urea cycle 1 / 5
L-glutamate degradation VII (to butanoate) 6 / 12
chorismate biosynthesis II (archaea) 6 / 12
L-citrulline biosynthesis 3 / 8
protocatechuate degradation I (meta-cleavage pathway) 3 / 8
shinorine biosynthesis 3 / 8
superpathway of atrazine degradation 3 / 8
superpathway of heme b biosynthesis from glycine 3 / 8
superpathway of methylglyoxal degradation 3 / 8
superpathway of polyamine biosynthesis II 3 / 8
γ-hexachlorocyclohexane degradation 5 / 11
C4 photosynthetic carbon assimilation cycle, NAD-ME type 5 / 11
superpathway of L-threonine metabolism 10 / 18
superpathway of histidine, purine, and pyrimidine biosynthesis 30 / 46
β-(1,4)-mannan degradation 2 / 7
3-methylbutanol biosynthesis (engineered) 2 / 7
6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus) 2 / 7
L-Nδ-acetylornithine biosynthesis 2 / 7
L-glutamate and L-glutamine biosynthesis 2 / 7
UTP and CTP dephosphorylation I 2 / 7
capsaicin biosynthesis 2 / 7
dTDP-β-L-digitoxose biosynthesis 2 / 7
dTDP-β-L-olivose biosynthesis 2 / 7
diacylglycerol and triacylglycerol biosynthesis 2 / 7
fatty acid β-oxidation I (generic) 2 / 7
fatty acid β-oxidation VI (mammalian peroxisome) 2 / 7
glyphosate degradation III 2 / 7
lipoprotein posttranslational modification (Gram-negative bacteria) 2 / 7
serotonin degradation 2 / 7
stigma estolide biosynthesis 2 / 7
sulfoquinovose degradation V 2 / 7
sulfur oxidation IV (intracellular sulfur) 2 / 7
ureide biosynthesis 2 / 7
peptidoglycan recycling I 7 / 14
superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) 4 / 10
tRNA processing 4 / 10
oxygenic photosynthesis 9 / 17
β-alanine biosynthesis II 1 / 6
γ-glutamyl cycle 1 / 6
10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast) 1 / 6
4-ethylphenol degradation (anaerobic) 1 / 6
6-gingerol analog biosynthesis (engineered) 1 / 6
L-alanine degradation VI (reductive Stickland reaction) 1 / 6
L-isoleucine degradation I 1 / 6
L-lysine degradation X 1 / 6
L-tryptophan biosynthesis 1 / 6
NAD(P)/NADPH interconversion 1 / 6
candicidin biosynthesis 1 / 6
catechol degradation III (ortho-cleavage pathway) 1 / 6
coenzyme M biosynthesis II 1 / 6
dTDP-α-D-ravidosamine and dTDP-4-acetyl-α-D-ravidosamine biosynthesis 1 / 6
dTDP-D-desosamine biosynthesis 1 / 6
fluoroacetate and fluorothreonine biosynthesis 1 / 6
formaldehyde oxidation I 1 / 6
glyoxylate cycle 1 / 6
hydrogen sulfide biosynthesis II (mammalian) 1 / 6
jasmonoyl-L-isoleucine inactivation 1 / 6
molybdopterin biosynthesis 1 / 6
nucleoside and nucleotide degradation (halobacteria) 1 / 6
paspaline biosynthesis 1 / 6
propanoate fermentation to 2-methylbutanoate 1 / 6
stearate biosynthesis I (animals) 1 / 6
superpathway of taurine degradation 1 / 6
superpathway of thiosulfate metabolism (Desulfovibrio sulfodismutans) 1 / 6
triethylamine degradation 1 / 6
wybutosine biosynthesis 1 / 6
folate transformations I 6 / 13
formaldehyde assimilation I (serine pathway) 6 / 13
superpathway of L-isoleucine biosynthesis I 6 / 13
1-butanol autotrophic biosynthesis (engineered) 16 / 27
NAD de novo biosynthesis II (from tryptophan) 3 / 9
UDP-sugars interconversion 3 / 9
jadomycin biosynthesis 3 / 9
nicotine biosynthesis 3 / 9
superpathway of S-adenosyl-L-methionine biosynthesis 3 / 9
superpathway of L-methionine biosynthesis (transsulfuration) 3 / 9
superpathway of sulfate assimilation and cysteine biosynthesis 3 / 9
mixed acid fermentation 8 / 16
superpathway of pyridoxal 5'-phosphate biosynthesis and salvage 5 / 12
(aminomethyl)phosphonate degradation 2 / 8
2-allylmalonyl-CoA biosynthesis 2 / 8
2-methylpropene degradation 2 / 8
4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis II 2 / 8
L-rhamnose degradation II 2 / 8
anandamide biosynthesis II 2 / 8
chitin derivatives degradation 2 / 8
dTDP-β-L-4-epi-vancosamine biosynthesis 2 / 8
dTDP-β-L-megosamine biosynthesis 2 / 8
glutathione-mediated detoxification I 2 / 8
glycogen biosynthesis III (from α-maltose 1-phosphate) 2 / 8
superpathway of L-homoserine and L-methionine biosynthesis 2 / 8
superpathway of NAD/NADP - NADH/NADPH interconversion (yeast) 2 / 8
superpathway of ornithine degradation 2 / 8
vanchrobactin biosynthesis 2 / 8
gallate degradation III (anaerobic) 4 / 11
purine nucleotides degradation II (aerobic) 4 / 11
4-methylcatechol degradation (ortho cleavage) 1 / 7
myo-inositol degradation I 1 / 7
C4 photosynthetic carbon assimilation cycle, NADP-ME type 1 / 7
L-isoleucine biosynthesis III 1 / 7
L-lysine degradation I 1 / 7
arachidonate biosynthesis III (6-desaturase, mammals) 1 / 7
benzoyl-CoA degradation I (aerobic) 1 / 7
brassicicene C biosynthesis 1 / 7
catechol degradation II (meta-cleavage pathway) 1 / 7
ceramide degradation by α-oxidation 1 / 7
chitin degradation I (archaea) 1 / 7
dTDP-β-L-mycarose biosynthesis 1 / 7
icosapentaenoate biosynthesis II (6-desaturase, mammals) 1 / 7
icosapentaenoate biosynthesis III (8-desaturase, mammals) 1 / 7
lacto-series glycosphingolipids biosynthesis 1 / 7
lipid A-core biosynthesis (P. gingivalis) 1 / 7
mevalonate pathway I (eukaryotes and bacteria) 1 / 7
mevalonate pathway II (haloarchaea) 1 / 7
protein N-glycosylation (bacterial) 1 / 7
pyoluteorin biosynthesis 1 / 7
pyruvate fermentation to propanoate I 1 / 7
retinol biosynthesis 1 / 7
roseoflavin biosynthesis 1 / 7
superpathway of salicylate degradation 1 / 7
thiocoraline biosynthesis 1 / 7
toluene degradation I (aerobic) (via o-cresol) 1 / 7
toluene degradation V (aerobic) (via toluene-cis-diol) 1 / 7
Arg/N-end rule pathway (eukaryotic) 6 / 14
L-arginine biosynthesis II (acetyl cycle) 3 / 10
[2Fe-2S] iron-sulfur cluster biosynthesis 3 / 10
reductive acetyl coenzyme A pathway I (homoacetogenic bacteria) 3 / 10
superpathway of menaquinol-7 biosynthesis 3 / 10
superpathway of vanillin and vanillate degradation 3 / 10
streptorubin B biosynthesis 20 / 34
L-arginine biosynthesis I (via L-ornithine) 2 / 9
L-arginine biosynthesis III (via N-acetyl-L-citrulline) 2 / 9
acinetobactin biosynthesis 2 / 9
allantoin degradation IV (anaerobic) 2 / 9
aromatic compounds degradation via β-ketoadipate 2 / 9
benzoate biosynthesis I (CoA-dependent, β-oxidative) 2 / 9
dTDP-α-D-forosamine biosynthesis 2 / 9
dTDP-α-D-olivose, dTDP-α-D-oliose and dTDP-α-D-mycarose biosynthesis 2 / 9
photorespiration I 2 / 9
pseudomonine biosynthesis 2 / 9
pyridoxal 5'-phosphate salvage II (plants) 2 / 9
teichuronic acid biosynthesis (B. subtilis 168) 2 / 9
ergotamine biosynthesis 4 / 12
superpathway of nicotine biosynthesis 4 / 12
photosynthetic 3-hydroxybutanoate biosynthesis (engineered) 14 / 26
2-deoxy-D-ribose degradation II 1 / 8
3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation 1 / 8
3-phosphoinositide biosynthesis 1 / 8
p-cumate degradation 1 / 8
adenosine nucleotides degradation I 1 / 8
anguibactin biosynthesis 1 / 8
butanol and isobutanol biosynthesis (engineered) 1 / 8
chlorogenic acid biosynthesis I 1 / 8
fusicoccin A biosynthesis 1 / 8
globo-series glycosphingolipids biosynthesis 1 / 8
isoprene biosynthesis II (engineered) 1 / 8
mevalonate pathway III (Thermoplasma) 1 / 8
mevalonate pathway IV (archaea) 1 / 8
nitrogen remobilization from senescing leaves 1 / 8
protein O-mannosylation I (yeast) 1 / 8
protein O-glycosylation (Neisseria) 1 / 8
tRNA-uridine 2-thiolation (cytoplasmic) 1 / 8
NAD salvage (plants) 3 / 11
enterobactin biosynthesis 3 / 11
reductive TCA cycle I 3 / 11
superpathway of candicidin biosynthesis 3 / 11
superpathway of Kdo2-lipid A biosynthesis 13 / 25
2-methyl-branched fatty acid β-oxidation 5 / 14
superpathway of GDP-mannose-derived O-antigen building blocks biosynthesis 5 / 14
oleate β-oxidation 20 / 35
(2S,3E)-2-amino-4-methoxy-but-3-enoate biosynthesis 2 / 10
3-phenylpropanoate degradation 2 / 10
9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast) 2 / 10
CMP-legionaminate biosynthesis I 2 / 10
anaerobic energy metabolism (invertebrates, mitochondrial) 2 / 10
methyl tert-butyl ether degradation 2 / 10
nucleoside and nucleotide degradation (archaea) 2 / 10
photorespiration II 2 / 10
sphingosine and sphingosine-1-phosphate metabolism 2 / 10
superpathway of coenzyme A biosynthesis II (plants) 2 / 10
superpathway of menaquinol-10 biosynthesis 2 / 10
superpathway of menaquinol-11 biosynthesis 2 / 10
superpathway of menaquinol-12 biosynthesis 2 / 10
superpathway of menaquinol-13 biosynthesis 2 / 10
superpathway of menaquinol-6 biosynthesis 2 / 10
superpathway of menaquinol-8 biosynthesis I 2 / 10
superpathway of menaquinol-9 biosynthesis 2 / 10
superpathway of quinolone and alkylquinolone biosynthesis 2 / 10
arsenic detoxification (mammals) 7 / 17
4-oxopentanoate degradation 1 / 9
L-arginine biosynthesis IV (archaea) 1 / 9
L-lysine biosynthesis I 1 / 9
L-lysine biosynthesis II 1 / 9
L-phenylalanine degradation IV (mammalian, via side chain) 1 / 9
TCA cycle II (plants and fungi) 1 / 9
TCA cycle IV (2-oxoglutarate decarboxylase) 1 / 9
TCA cycle V (2-oxoglutarate synthase) 1 / 9
TCA cycle VI (Helicobacter) 1 / 9
ansatrienin biosynthesis 1 / 9
avenanthramide biosynthesis 1 / 9
chloramphenicol biosynthesis 1 / 9
myxochelin A and B biosynthesis 1 / 9
phenylacetate degradation I (aerobic) 1 / 9
photorespiration III 1 / 9
starch degradation II 1 / 9
superpathway of demethylmenaquinol-6 biosynthesis I 1 / 9
superpathway of demethylmenaquinol-8 biosynthesis I 1 / 9
superpathway of demethylmenaquinol-9 biosynthesis 1 / 9
superpathway of menaquinol-8 biosynthesis III 1 / 9
viridicatumtoxin biosynthesis 1 / 9
anandamide biosynthesis I 3 / 12
arsenic detoxification (yeast) 3 / 12
peptidoglycan maturation (meso-diaminopimelate containing) 3 / 12
reductive TCA cycle II 3 / 12
superpathway of L-citrulline metabolism 3 / 12
superpathway of L-methionine biosynthesis (by sulfhydrylation) 3 / 12
superpathway of fucose and rhamnose degradation 3 / 12
syringate degradation 3 / 12
superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass 13 / 26
superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle 10 / 22
L-glutamate degradation VIII (to propanoate) 2 / 11
L-methionine salvage cycle II (plants) 2 / 11
ethylmalonyl-CoA pathway 2 / 11
tRNA-uridine 2-thiolation and selenation (bacteria) 2 / 11
toluene degradation III (aerobic) (via p-cresol) 2 / 11
gluconeogenesis II (Methanobacterium thermoautotrophicum) 7 / 18
C4 photosynthetic carbon assimilation cycle, PEPCK type 4 / 14
superpathway of NAD biosynthesis in eukaryotes 4 / 14
superpathway of glyoxylate cycle and fatty acid degradation 4 / 14
meta cleavage pathway of aromatic compounds 1 / 10
myo-, chiro- and scyllo-inositol degradation 1 / 10
C25,25 CDP-archaeol biosynthesis 1 / 10
L-histidine biosynthesis 1 / 10
TCA cycle I (prokaryotic) 1 / 10
TCA cycle III (animals) 1 / 10
bacilysin biosynthesis 1 / 10
clorobiocin biosynthesis 1 / 10
curcuminoid biosynthesis 1 / 10
peptidoglycan recycling II 1 / 10
petrobactin biosynthesis 1 / 10
phenylpropanoids methylation (ice plant) 1 / 10
poly(3-O-β-D-glucopyranosyl-N-acetylgalactosamine 1-phosphate) wall teichoic acid biosynthesis 1 / 10
rosmarinic acid biosynthesis I 1 / 10
superpathway of enterobacterial common antigen biosynthesis 1 / 10
superpathway of menaquinol-8 biosynthesis II 1 / 10
tetracenomycin C biosynthesis 1 / 10
superpathway of anaerobic energy metabolism (invertebrates) 6 / 17
superpathway of arginine and polyamine biosynthesis 6 / 17
coumarins biosynthesis (engineered) 3 / 13
superpathway of L-arginine and L-ornithine degradation 3 / 13
L-methionine salvage cycle I (bacteria and plants) 2 / 12
bacillibactin biosynthesis 2 / 12
indole-3-acetate biosynthesis II 2 / 12
superpathway of sulfide oxidation (phototrophic sulfur bacteria) 2 / 12
superpathway of ubiquinol-8 biosynthesis (early decarboxylation) 2 / 12
purine nucleobases degradation I (anaerobic) 4 / 15
superpathway of L-lysine, L-threonine and L-methionine biosynthesis II 4 / 15
superpathway of phylloquinol biosynthesis 4 / 15
(8E,10E)-dodeca-8,10-dienol biosynthesis 1 / 11
(S)-reticuline biosynthesis I 1 / 11
p-cymene degradation 1 / 11
L-methionine salvage cycle III 1 / 11
cytochrome c biogenesis (system I type) 1 / 11
mycobactin biosynthesis 1 / 11
poly(glycerol phosphate) wall teichoic acid biosynthesis 1 / 11
protein N-glycosylation (Haloferax volcanii) 1 / 11
pyochelin biosynthesis 1 / 11
superpathway of L-arginine, putrescine, and 4-aminobutanoate degradation 1 / 11
superpathway of phenylethylamine degradation 1 / 11
tropane alkaloids biosynthesis 1 / 11
3-hydroxypropanoate/4-hydroxybutanate cycle 6 / 18
aspartate superpathway 11 / 25
ethene biosynthesis V (engineered) 11 / 25
hypoglycin biosynthesis 3 / 14
purine nucleobases degradation II (anaerobic) 10 / 24
3-hydroxypropanoate cycle 2 / 13
guadinomine B biosynthesis 2 / 13
noradrenaline and adrenaline degradation 2 / 13
superpathway of L-methionine salvage and degradation 4 / 16
superpathway of hyoscyamine (atropine) and scopolamine biosynthesis 4 / 16
10-cis-heptadecenoyl-CoA degradation (yeast) 1 / 12
10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast) 1 / 12
L-tryptophan degradation IX 1 / 12
L-tryptophan degradation XII (Geobacillus) 1 / 12
naphthalene degradation to acetyl-CoA 1 / 12
neolacto-series glycosphingolipids biosynthesis 1 / 12
poly(ribitol phosphate) wall teichoic acid biosynthesis I (B. subtilis) 1 / 12
purine nucleotides degradation I (plants) 1 / 12
superpathway of glyoxylate bypass and TCA 1 / 12
L-tryptophan degradation III (eukaryotic) 3 / 15
salinosporamide A biosynthesis 3 / 15
superpathway of L-lysine, L-threonine and L-methionine biosynthesis I 5 / 18
superpathway of ergotamine biosynthesis 5 / 18
pederin biosynthesis 2 / 14
tetrahydromethanopterin biosynthesis 2 / 14
superpathway of branched chain amino acid biosynthesis 4 / 17
type I lipoteichoic acid biosynthesis (S. aureus) 4 / 17
(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase) 1 / 13
L-tryptophan degradation V (side chain pathway) 1 / 13
glyoxylate assimilation 1 / 13
sphingolipid biosynthesis (plants) 1 / 13
toluene degradation IV (aerobic) (via catechol) 1 / 13
crotonate fermentation (to acetate and cyclohexane carboxylate) 3 / 16
superpathway of seleno-compound metabolism 5 / 19
cyclosporin A biosynthesis 2 / 15
sporopollenin precursors biosynthesis 4 / 18
crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered) 1 / 14
docosahexaenoate biosynthesis III (6-desaturase, mammals) 1 / 14
poly(ribitol phosphate) wall teichoic acid biosynthesis II (S. aureus) 1 / 14
pyrrolomycin biosynthesis 1 / 14
superpathway of rosmarinic acid biosynthesis 1 / 14
Ac/N-end rule pathway 6 / 21
benzoate fermentation (to acetate and cyclohexane carboxylate) 3 / 17
ceramide and sphingolipid recycling and degradation (yeast) 2 / 16
plasmalogen biosynthesis I (aerobic) 2 / 16
jasmonic acid biosynthesis 4 / 19
methylaspartate cycle 4 / 19
superpathway of dTDP-glucose-derived O-antigen building blocks biosynthesis 4 / 19
monolignol biosynthesis 1 / 15
toluene degradation VI (anaerobic) 3 / 18
superpathway of phospholipid biosynthesis II (plants) 10 / 28
cholesterol degradation to androstenedione I (cholesterol oxidase) 2 / 17
cutin biosynthesis 1 / 16
sulfazecin biosynthesis 1 / 16
tRNA methylation (yeast) 1 / 16
superpathway of ergosterol biosynthesis II 8 / 26
mandelate degradation to acetyl-CoA 2 / 18
streptomycin biosynthesis 2 / 18
superpathway of the 3-hydroxypropanoate cycle 2 / 18
superpathway of UDP-N-acetylglucosamine-derived O-antigen building blocks biosynthesis 6 / 24
suberin monomers biosynthesis 3 / 20
bryostatin biosynthesis 2 / 19
superpathway of novobiocin biosynthesis 2 / 19
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis 1 / 18
sitosterol degradation to androstenedione 1 / 18
superpathway of purines degradation in plants 1 / 18
androstenedione degradation I (aerobic) 6 / 25
protein N-glycosylation initial phase (eukaryotic) 1 / 19
superpathway of erythromycin biosynthesis 1 / 19
superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis 11 / 33
superpathway of methanogenesis 2 / 21
cholesterol degradation to androstenedione II (cholesterol dehydrogenase) 2 / 22
superpathway of megalomicin A biosynthesis 2 / 22
superpathway of testosterone and androsterone degradation 6 / 28
superpathway of dTDP-glucose-derived antibiotic building blocks biosynthesis 2 / 23
ganglio-series glycosphingolipids biosynthesis 1 / 22
androstenedione degradation II (anaerobic) 4 / 27
platensimycin biosynthesis 3 / 26
superpathway of bacteriochlorophyll a biosynthesis 3 / 26
superpathway of ergosterol biosynthesis I 3 / 26
superpathway of chorismate metabolism 26 / 59
superpathway of L-lysine degradation 14 / 43
phosalacine biosynthesis 1 / 25
phosphinothricin tripeptide biosynthesis 1 / 25
anaerobic aromatic compound degradation (Thauera aromatica) 2 / 27
mupirocin biosynthesis 1 / 26
superpathway of inositol phosphate compounds 1 / 26
superpathway of aerobic toluene degradation 3 / 30
corallopyronin A biosynthesis 2 / 30
colibactin biosynthesis 7 / 38
superpathway of aromatic compound degradation via 3-oxoadipate 4 / 35
superpathway of cholesterol degradation I (cholesterol oxidase) 8 / 42
Methanobacterium thermoautotrophicum biosynthetic metabolism 16 / 56
superpathway of cholesterol biosynthesis 3 / 38
superpathway of cholesterol degradation II (cholesterol dehydrogenase) 8 / 47
superpathway of aromatic compound degradation via 2-hydroxypentadienoate 3 / 42
superpathway of glycosphingolipids biosynthesis 1 / 42
superpathway of cholesterol degradation III (oxidase) 4 / 49
mycolate biosynthesis 18 / 205
superpathway of mycolate biosynthesis 19 / 239

Only pathways with at least one candidate gene are shown