MetaCyc Pathway: anaerobic energy metabolism (invertebrates, cytosol) in Rhodanobacter sp000427505 FW510-R12

Add experiment(s):


Phosphoenolpyruvate carboxykinase (GTP) (in reverse):
phosphoenolpyruvate + CO2 + GDP→oxaloacetate + GTP
(EC 4.1.1.32)
LRK53_RS04585
Pyruvate kinase (in reverse):
phosphoenolpyruvate + ADP + H+→pyruvate + ATP
(EC 2.7.1.40)
LRK53_RS17135
Phosphoenolpyruvate carboxykinase (GTP) (in reverse):
phosphoenolpyruvate + CO2 + IDP→oxaloacetate + ITP
(EC 4.1.1.32)
LRK53_RS04585
Alanine transaminase (in reverse):
pyruvate + L-glutamate→2-oxoglutarate + L-alanine
(EC 2.6.1.2)
LRK53_RS04055
Malate dehydrogenase (in reverse):
oxaloacetate + NADH + H+→(S)-malate + NAD+
(EC 1.1.1.37; 1.1.1.38)
LRK53_RS09435
Alanine racemase:
L-alanine→D-alanine
(EC 5.1.1.1; 5.1.1.10)
LRK53_RS09565
Aspartate transaminase:
2-oxoglutarate + L-aspartate→L-glutamate + oxaloacetate
(EC 2.6.1.1)
LRK53_RS04055
LRK53_RS09300
LRK53_RS09430
LRK53_RS12495

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information