MetaCyc Pathway: L-asparagine biosynthesis III (tRNA-dependent) in Pseudomonas fluorescens GW456-L13

Add experiment(s):


Glutamate synthase (NADPH):
L-glutamine + H2O→ammonia + L-glutamate + H+
(EC 1.4.1.13; 1.4.1.14; 1.4.7.1; 2.6.1.85; 3.5.1.2; 3.5.1.38; 4.1.3.27; 4.3.2.10; 4.3.3.6; 6.3.4.2; 6.3.5.13; 6.3.5.2; 6.3.5.4; 6.3.5.5; 6.3.5.6; 6.3.5.7)
PfGW456L13_1217
PfGW456L13_1220
PfGW456L13_1310
PfGW456L13_1714
PfGW456L13_1784
PfGW456L13_1947
PfGW456L13_2154
PfGW456L13_2223
PfGW456L13_2547
PfGW456L13_271
PfGW456L13_272
PfGW456L13_3117
PfGW456L13_3507
PfGW456L13_3622
PfGW456L13_3652
PfGW456L13_3742
PfGW456L13_3914
PfGW456L13_4123
PfGW456L13_4145
PfGW456L13_4227
PfGW456L13_4364
PfGW456L13_4595
PfGW456L13_4688
PfGW456L13_4785
PfGW456L13_4817
PfGW456L13_5034
PfGW456L13_5035
PfGW456L13_5036
PfGW456L13_5099
PfGW456L13_5100
Aspartate--tRNA(Asn) ligase:
L-aspartate + tRNAAsn + ATP→an L-aspartyl-[tRNAAsn] + AMP + diphosphate
(EC 6.1.1.23)
PfGW456L13_1849
Asparaginyl-tRNA synthase (glutamine-hydrolyzing):
an L-aspartyl-[tRNAAsn] + ATP→a 4-phosphooxy-L-aspartyl-[tRNAAsn] + ADP
(EC 6.3.5.6)
PfGW456L13_3117
PfGW456L13_3622
PfGW456L13_3652
PfGW456L13_5034
PfGW456L13_5035
PfGW456L13_5036
Asparaginyl-tRNA synthase (glutamine-hydrolyzing):
a 4-phosphooxy-L-aspartyl-[tRNAAsn] + ammonia→an L-asparaginyl-[tRNAAsn] + phosphate
(EC 6.3.5.6)
PfGW456L13_3117
PfGW456L13_3622
PfGW456L13_3652
PfGW456L13_5034
PfGW456L13_5035
PfGW456L13_5036

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information