MetaCyc Pathway: superpathway of putrescine biosynthesis in Pseudomonas fluorescens GW456-L13

Add experiment(s):


Arginine decarboxylase:
L-arginine + H+→agmatine + CO2
(EC 4.1.1.19)
PfGW456L13_3336
PfGW456L13_3776
PfGW456L13_43
PfGW456L13_5067
Arginase:
L-arginine + H2O→L-ornithine + urea
(EC 3.5.3.1)
No genes
Agmatinase:
agmatine + H2O→putrescine + urea
(EC 3.5.3.11)
PfGW456L13_2689
PfGW456L13_2989
PfGW456L13_2993
PfGW456L13_4435
Ornithine decarboxylase:
L-ornithine + H+→putrescine + CO2
(EC 4.1.1.17)
PfGW456L13_3776
PfGW456L13_5067

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information