MetaCyc Pathway: aerobic respiration III (alternative oxidase pathway) in Xanthobacter sp. DMC5

MetaCyc Pathway: aerobic respiration III (alternative oxidase pathway) in Xanthobacter sp. DMC5

NADH_[in] + 5 H⁺_[in] + a ubiquinone→a ubiquinol + NAD⁺_[in] + 4 H⁺_[out] (EC 7.1.1.2)

Succinate dehydrogenase (ubiquinone):
succinate_[in] + a ubiquinone→a ubiquinol + fumarate_[in] (EC 1.3.5.1)

2 a ubiquinol + dioxygen_[in]→2 H₂O_[in] + 2 a ubiquinone (EC 1.10.3.11)

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Pathway details at MetaCyc
Fitness data for 22 genes
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All MetaCyc pathways for Xanthobacter sp. DMC5

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information