MetaCyc Pathway: indole-3-acetate biosynthesis VI (bacteria) in Pseudomonas simiae WCS417

Add experiment(s):


Aspartate transaminase:
L-tryptophan + 2-oxoglutarate→(indol-3-yl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27)
PS417_08560
PS417_09070
PS417_09120
PS417_11840
PS417_12775
PS417_12985
PS417_13545
PS417_14865
PS417_15040
PS417_15990
PS417_19025
PS417_19385
PS417_19910
PS417_21030
PS417_21275
PS417_23120
PS417_27730
PS417_28165
Indolepyruvate decarboxylase:
(indol-3-yl)pyruvate + H+→(indol-3-yl)acetaldehyde + CO2 (EC 4.1.1.74)
No genes
Indole-3-acetaldehyde oxidase:
(indol-3-yl)acetaldehyde + dioxygen + H2O→(indol-3-yl)acetate + hydrogen peroxide + H+ (EC 1.2.3.7)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information