MetaCyc Pathway: lipoxin biosynthesis in Variovorax sp. SCN45

Add experiment(s):


Arachidonate 15-lipoxygenase:
arachidonate + dioxygen→(15S)-HpETE
(EC 1.13.11.33)
GFF5228
Arachidonate 5-lipoxygenase:
arachidonate + dioxygen→(5S)-HpETE
(EC 1.13.11.34)
No genes
Arachidonate 5-lipoxygenase:
(5S)-HpETE→leukotriene A4 + H2O
(EC 1.13.11.34)
No genes
Phospholipid-hydroperoxide glutathione peroxidase:
(15S)-HpETE + 2 glutathione→15(S)-HETE + glutathione disulfide + H2O
(EC 1.11.1.12)
No genes
Arachidonate 12-lipoxygenase:
leukotriene A4 + a reduced two electron carrier + dioxygen→(5S,7E,9E,11Z,13E,15S)-15-hydroperoxy-5-hydroxyicosa-7,9,11,13-tetraenoate + an oxidized electron carrier
(EC 1.13.11.31)
No genes
Arachidonate 15-lipoxygenase:
15(S)-HETE + dioxygen→(5S,6E,8Z,11Z,13E,15S)-5-hydroperoxy-15-hydroxyicosa-6,8,11,13-tetraenoate
(EC 1.13.11.33; 1.13.11.34)
GFF5228
Arachidonate 15-lipoxygenase:
(5S,6E,8Z,11Z,13E,15S)-5-hydroperoxy-15-hydroxyicosa-6,8,11,13-tetraenoate→(7E,9E,11Z,13E,15S)-(5S,6S)-5,6-epoxyicosa-15-hydroxy-7,9,11,13-tetraenoate + H2O
(EC 1.13.11.33; 1.13.11.34)
GFF5228
(5S,7E,9E,11Z,13E,15S)-15-hydroperoxy-5-hydroxyicosa-7,9,11,13-tetraenoate→lipoxin A4 (spontaneous)
No genes
(5S,7E,9E,11Z,13E,15S)-15-hydroperoxy-5-hydroxyicosa-7,9,11,13-tetraenoate→lipoxin B4 (spontaneous)
No genes
(7E,9E,11Z,13E,15S)-(5S,6S)-5,6-epoxyicosa-15-hydroxy-7,9,11,13-tetraenoate + H2O→lipoxin A4
No genes
Arachidonate 15-lipoxygenase:
(7E,9E,11Z,13E,15S)-(5S,6S)-5,6-epoxyicosa-15-hydroxy-7,9,11,13-tetraenoate + H2O→lipoxin B4
(EC 1.13.11.33)
GFF5228

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information