MetaCyc Pathway: platensimycin biosynthesis in Variovorax sp. SCN45

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Ent-copalyl diphosphate synthase:
geranylgeranyl diphosphate→(-)-ent-copalyl diphosphate
(EC 5.5.1.13)
No genes
Aspartate kinase:
L-aspartate + ATP→L-aspartyl-4-phosphate + ADP
(EC 2.7.2.4)
GFF546
GFF7953
a sulfur-carrier protein with a C-terminal Gly-Gly + ATP + H+→a carboxy-adenylated [sulfur-carrier protein with a C-terminal Gly-Gly] + diphosphate
No genes
Aspartate-semialdehyde dehydrogenase (in reverse):
L-aspartyl-4-phosphate + NADPH + H+→L-aspartate 4-semialdehyde + NADP+ + phosphate
(EC 1.2.1.11)
GFF3887
a carboxy-adenylated [sulfur-carrier protein with a C-terminal Gly-Gly] + a reduced two electron carrier + a sulfurated [sulfur carrier]→a thiocarboxylated [sulfur-carrier protein with a C-terminal Gly-Gly] + AMP + an oxidized electron carrier + H+ + an unsulfurated [sulfur carrier]
No genes
(-)-ent-copalyl diphosphate + H2O→(16R)-ent-kauran-16-ol + diphosphate
No genes
L-aspartate 4-semialdehyde + glycerone phosphate→2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate (EC 4.1.2.56)
No genes
(16R)-ent-kauran-16-ol→(16R)-ent-kauran-16,19-diol
No genes
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate→3-amino-4-hydroxybenzoate + H+ + phosphate + 2 H2O (EC 4.1.99.20)
No genes
(16R)-ent-kauran-16,19-diol→(16R)-hydroxy-ent-kauran-19-oate
No genes
3-amino-4-hydroxybenzoate + NADPH + dioxygen + H+→3-amino-2,4-dihydroxybenzoate + NADP+ + H2O (EC 1.14.13.249)
No genes
(16R)-hydroxy-ent-kauran-19-oate + dioxygen + 2 H+ + 2 a reduced ferredoxin [iron-sulfur] cluster→(11S,16S)-ent-kauran-11,16-epoxy-19-oate + 2 an oxidized ferredoxin [iron-sulfur] cluster + 2 H2O
No genes
3-amino-2,4-dihydroxybenzoate + ATP + coenzyme A→3-amino-2,4-dihydroxybenzoyl-CoA + AMP + diphosphate
No genes
(11S,16S)-ent-kauran-11,16-epoxy-19-oate + 2-oxoglutarate + dioxygen→(7S,11S,16S)-7-hydroxy-ent-kauran-11,16-epoxy-19-oate + CO2 + succinate
No genes
3-amino-2,4-dihydroxybenzoyl-CoA + a thiocarboxylated [sulfur-carrier protein with a C-terminal Gly-Gly] + H2O→a sulfur-carrier protein with a C-terminal Gly-Gly + 3-amino-2,4-dihydroxybenzoylsulfanide + coenzyme A + 2 H+
No genes
(7S,11S,16S)-7-hydroxy-ent-kauran-11,16-epoxy-19-oate + NAD+→(11S,16S)-7-oxo-ent-kauran-11,16-epoxy-19-oate + NADH + H+
No genes
(11S,16S)-7-oxo-ent-kauran-11,16-epoxy-19-oate + NADPH + H+→(7R,11S,16S)-7-hydroxy-ent-kauran-11,16-epoxy-19-oate + NADP+
No genes
(7R,11S,16S)-7-hydroxy-ent-kauran-11,16-epoxy-19-oate + ATP + H+→(7R,11S,16S)-7-hydroxy-ent-kauran-11,16-epoxy-19-oyl-AMP + diphosphate
No genes
(7R,11S,16S)-7-hydroxy-ent-kauran-11,16-epoxy-19-oyl-AMP + coenzyme A→(7R,11S,16S)-7-hydroxy-ent-kauran-11,16-epoxy-19-oyl-CoA + AMP + H+
No genes
(7R,11S,16S)-7-hydroxy-ent-kauran-11,16-epoxy-19-oyl-CoA + an oxidized electron carrier→(4S)-homoplatensicyl-CoA + a reduced two electron carrier
No genes
(4S)-homoplatensicyl-CoA + an oxidized electron-transfer flavoprotein + H+→homoplatensic-4-enyl-CoA + a reduced electron-transfer flavoprotein
No genes
Enoyl-CoA hydratase (in reverse):
homoplatensic-4-enyl-CoA + H2O→(3S)-3-hydroxy-homoplatensic-CoA
(EC 4.2.1.17)
GFF1046
GFF1240
GFF1342
GFF1460
GFF1461
GFF1482
GFF2128
GFF2283
GFF2642
GFF2684
GFF2700
GFF2966
GFF3330
GFF3377
GFF3404
GFF3602
GFF361
GFF362
GFF4202
GFF4311
GFF4320
GFF4327
GFF4329
GFF4334
GFF4568
GFF4572
GFF4601
GFF4608
GFF461
GFF4865
GFF4867
GFF5577
GFF6051
GFF6089
GFF6313
GFF7050
GFF717
GFF7362
GFF7367
GFF7368
GFF7380
3-hydroxyacyl-CoA dehydrogenase:
(3S)-3-hydroxy-homoplatensic-CoA + NAD+→3-oxo-homoplatensic-CoA + NADH + H+
(EC 1.1.1.35)
GFF1342
GFF3380
GFF361
GFF3963
GFF4320
GFF4568
GFF4608
Acetyl-CoA C-acyltransferase (in reverse):
3-oxo-homoplatensic-CoA + coenzyme A→platensicyl-CoA + propanoyl-CoA
(EC 2.3.1.16)
GFF1344
GFF1993
GFF2105
GFF2232
GFF2768
GFF2790
GFF2965
GFF4299
GFF4569
GFF4606
GFF4864
GFF5684
GFF6312
GFF7369
GFF809
3-amino-2,4-dihydroxybenzoylsulfanide + platensicyl-CoA + H+→thioplatensimycin + coenzyme A
No genes
thioplatensimycin + H2O→platensimycin + hydrogen sulfide + H+ (spontaneous)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information