MetaCyc Pathway: 2-methylpropene degradation in Variovorax sp. SCN45

Add experiment(s):


Alkene monooxygenase:
2-methylprop-1-ene + NADH + dioxygen + H+→1,2-epoxy-2-methylpropane + NAD+ + H2O (EC 1.14.13.69)
No genes
Soluble epoxide hydrolase:
1,2-epoxy-2-methylpropane + H2O→2-methylpropane-1,2-diol (EC 3.3.2.10)
No genes
2-methylpropane-1,2-diol + NAD+→2-hydroxy-2-methylpropanal + NADH + H+ (EC 1.1.1.400)
No genes
2-hydroxy-2-methylpropanal + NAD+ + H2O→2-hydroxy-2-methylpropanoate + NADH + 2 H+ (EC 1.2.1.98)
No genes
2-hydroxy-2-methylpropanoate + ATP + coenzyme A→2-hydroxy-2-methylpropanoyl-CoA + AMP + diphosphate (EC 6.2.1.M4)
No genes
2-hydroxy-2-methylpropanoyl-CoA→(S)-3-hydroxybutanoyl-CoA (EC 5.4.99.64)
No genes
3-hydroxyacyl-CoA dehydrogenase:
(S)-3-hydroxybutanoyl-CoA + NAD+→acetoacetyl-CoA + NADH + H+ (EC 1.1.1.35)
GFF1342
GFF3380
GFF3603
GFF361
GFF3963
GFF4320
GFF4568
GFF4608
Acetyl-CoA C-acyltransferase (in reverse):
acetoacetyl-CoA + coenzyme A→2 acetyl-CoA (EC 2.3.1.16; 2.3.1.9)
GFF1344
GFF1993
GFF2105
GFF2232
GFF2768
GFF2790
GFF2965
GFF4299
GFF4569
GFF4606
GFF4864
GFF5684
GFF6312
GFF7369
GFF809

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information