MetaCyc Pathway: superpathway of anaerobic sucrose degradation in Variovorax sp. SCN45

Add experiment(s):


Sucrose synthase (in reverse):
sucrose + H+ + UDP→β-D-fructofuranose + UDP-α-D-glucose
(EC 2.4.1.13)
No genes
Fructokinase:
β-D-fructofuranose + ATP→β-D-fructofuranose 6-phosphate + ADP + H+
(EC 2.7.1.4)
GFF5279
UTP-monosaccharide-1-phosphate uridylyltransferase (in reverse):
UDP-α-D-glucose + diphosphate→α-D-glucopyranose 1-phosphate + H+ + UTP
(EC 2.7.7.64; 2.7.7.9)
GFF6022
6-phosphofructokinase:
β-D-fructofuranose 6-phosphate + ATP→β-D-fructofuranose 1,6-bisphosphate + ADP + H+
(EC 2.7.1.11)
GFF6315
Phosphoglucomutase:
α-D-glucopyranose 1-phosphate→D-glucopyranose 6-phosphate
(EC 5.4.2.2)
GFF1309
GFF367
GFF6532
Fructose-bisphosphate aldolase:
β-D-fructofuranose 1,6-bisphosphate→glycerone phosphate + D-glyceraldehyde 3-phosphate
(EC 4.1.2.13)
GFF1228
GFF4952
GFF5508
GFF7926
Fructose-bisphosphatase:
β-D-fructofuranose 1,6-bisphosphate + H2O→β-D-fructofuranose 6-phosphate + phosphate
(EC 3.1.3.11)
GFF3119
Glucose-6-phosphate isomerase:
α-D-glucose 6-phosphate→β-D-fructofuranose 6-phosphate
(EC 5.3.1.9)
GFF5267
Triose-phosphate isomerase (in reverse):
glycerone phosphate→D-glyceraldehyde 3-phosphate
(EC 5.3.1.1)
GFF4748
Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating):
D-glyceraldehyde 3-phosphate + NAD+ + phosphate→3-phospho-D-glyceroyl phosphate + NADH + H+
(EC 1.2.1.12)
GFF7175
Phosphoglycerate kinase (in reverse):
3-phospho-D-glyceroyl phosphate + ADP→3-phospho-D-glycerate + ATP
(EC 2.7.2.3)
GFF5503
GFF7569
3-phospho-D-glycerate→2-phospho-D-glycerate (EC 5.4.2.12)
GFF2329
GFF2569
GFF7312
3-phospho-D-glycerate→2-phospho-D-glycerate (EC 5.4.2.11)
GFF2569
Phosphopyruvate hydratase:
2-phospho-D-glycerate→phosphoenolpyruvate + H2O
(EC 4.2.1.11)
GFF2753
Pyruvate kinase (in reverse):
phosphoenolpyruvate + ADP + H+→pyruvate + ATP
(EC 2.7.1.40)
GFF5504
GFF6584
GFF7468
L-lactate dehydrogenase (in reverse):
pyruvate + NADH + H+→(S)-lactate + NAD+
(EC 1.1.1.27)
GFF7263
Pyruvate, water dikinase:
pyruvate + ATP + H2O→phosphoenolpyruvate + AMP + 2 H+ + phosphate
(EC 2.7.9.2)
GFF2818
GFF5426
Pyruvate decarboxylase:
pyruvate + H+→acetaldehyde + CO2
(EC 4.1.1.1)
No genes
Alcohol dehydrogenase (in reverse):
acetaldehyde + NADH + H+→ethanol + NAD+
(EC 1.1.1.1)
GFF1624
GFF2259
GFF25
GFF2941
GFF3536
GFF4226
GFF4355
GFF6593
GFF6951
GFF909

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information