| a 2,3,4-saturated fatty acid + ATP + coenzyme A→a 2,3,4-saturated fatty acyl CoA + AMP + diphosphate |
| No genes |
Acyl-CoA oxidase:
a 2,3,4-saturated fatty acyl CoA + dioxygen→a (2E)-2-enoyl-CoA + hydrogen peroxide (EC 1.3.3.6) |
| No genes |
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA (EC 4.2.1.17) |
| GFF1046 |
| GFF1240 |
| GFF1342 |
| GFF1460 |
| GFF1461 |
| GFF1482 |
| GFF2128 |
| GFF2283 |
| GFF2642 |
| GFF2684 |
| GFF2700 |
| GFF2966 |
| GFF3330 |
| GFF3377 |
| GFF3404 |
| GFF3602 |
| GFF361 |
| GFF362 |
| GFF4202 |
| GFF4311 |
| GFF4320 |
| GFF4327 |
| GFF4329 |
| GFF4334 |
| GFF4568 |
| GFF4572 |
| GFF4601 |
| GFF4608 |
| GFF461 |
| GFF4865 |
| GFF4867 |
| GFF5577 |
| GFF6051 |
| GFF6089 |
| GFF6313 |
| GFF7050 |
| GFF717 |
| GFF7362 |
| GFF7367 |
| GFF7368 |
| GFF7380 |
3-hydroxyacyl-CoA dehydrogenase:
a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA + NAD+→a 2,3,4-saturated 3-oxoacyl-CoA + NADH + H+ (EC 1.1.1.35) |
| GFF1342 |
| GFF3380 |
| GFF361 |
| GFF3963 |
| GFF4320 |
| GFF4568 |
| GFF4608 |
Acetyl-CoA C-acyltransferase (in reverse):
a 2,3,4-saturated 3-oxoacyl-CoA + coenzyme A→a 2,3,4-saturated fatty acyl CoA + acetyl-CoA (EC 2.3.1.16) |
| GFF1344 |
| GFF1993 |
| GFF2105 |
| GFF2232 |
| GFF2768 |
| GFF2790 |
| GFF2965 |
| GFF4299 |
| GFF4569 |
| GFF4606 |
| GFF4864 |
| GFF5684 |
| GFF6312 |
| GFF7369 |
| GFF809 |
Citrate (Si)-synthase:
acetyl-CoA + oxaloacetate + H2O→citrate + coenzyme A + H+ (EC 2.3.3.1; 2.3.3.16; 2.3.3.3) |
| GFF3894 |
| GFF5615 |
| GFF6008 |
Aconitate hydratase:
citrate→cis-aconitate + H2O (EC 4.2.1.3) |
| GFF270 |
| GFF3905 |
| GFF3909 |
Aconitate hydratase:
cis-aconitate + H2O→D-threo-isocitrate (EC 4.2.1.3) |
| GFF270 |
| GFF3905 |
| GFF3909 |
Isocitrate lyase:
D-threo-isocitrate→glyoxylate + succinate (EC 4.1.3.1) |
| GFF4829 |
Malate synthase:
acetyl-CoA + glyoxylate + H2O→(S)-malate + coenzyme A + H+ (EC 2.3.3.9) |
| GFF6305 |
Succinate dehydrogenase (ubiquinone):
succinate[in] + an electron-transfer quinone→fumarate[in] + an electron-transfer quinol (EC 1.3.5.1) |
| GFF3897 |
Fumarate hydratase (in reverse):
fumarate + H2O→(S)-malate (EC 4.2.1.2) |
| GFF1583 |
| GFF1584 |
| GFF1887 |
| GFF479 |
| GFF483 |
Malate dehydrogenase:
(S)-malate + NAD+→oxaloacetate + NADH + H+ (EC 1.1.1.37; 1.1.1.38) |
| GFF1718 |
| GFF3901 |
| GFF414 |
| GFF4621 |
| GFF7263 |
Phosphoenolpyruvate carboxykinase (ATP):
oxaloacetate + ATP→phosphoenolpyruvate + ADP + CO2 (EC 4.1.1.49) |
| No genes |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information