MetaCyc Pathway: 2-deoxy-D-ribose degradation II in Variovorax sp. OAS795

2-deoxy-β-D-ribopyranose + 2 an oxidized c-type cytochrome→2-deoxy-ribono-1,5-lactone + 2 a reduced c-type cytochrome + 2 H+ (EC 1.1.2.M2)

ABID97_RS29115

2-deoxy-ribono-1,5-lactone + H2O→2-deoxy-D-ribonate + H+

ABID97_RS28795

2-deoxy-D-ribonate + NAD+→2-deoxy-3-dehydro-D-ribonate + NADH + H+ (EC 1.1.1.M55)

ABID97_RS28805

2-deoxy-3-dehydro-D-ribonate + acetyl-CoA→acetoacetate + D-glyceroyl-CoA

ABID97_RS28800

Acetoacetate--CoA ligase: acetoacetate + ATP + coenzyme A→acetoacetyl-CoA + AMP + diphosphate (EC 6.2.1.16)

ABID97_RS03180

ABID97_RS17465

ABID97_RS25135

D-glyceroyl-CoA + H2O→D-glycerate + coenzyme A + H+

No genes

Acetyl-CoA C-acyltransferase (in reverse): acetoacetyl-CoA + coenzyme A→2 acetyl-CoA (EC 2.3.1.16; 2.3.1.9)

ABID97_RS04675

ABID97_RS05875

ABID97_RS06005

ABID97_RS10975

ABID97_RS11335

ABID97_RS11380

ABID97_RS12420

ABID97_RS15750

ABID97_RS18615

ABID97_RS18775

ABID97_RS20240

ABID97_RS24190

ABID97_RS25195

ABID97_RS26575

ABID97_RS27835

ABID97_RS28230

ABID97_RS28270

ABID97_RS28430

D-glycerate + ATP→2-phospho-D-glycerate + ADP + H+ (EC 2.7.1.165)

No genes

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information