MetaCyc Pathway: superpathway of plastoquinol biosynthesis in Variovorax sp. OAS795

Add experiment(s):


geranyl diphosphate + 7 3-methylbut-3-en-1-yl diphosphate→all-trans-nonaprenyl diphosphate + 7 diphosphate (EC 2.5.1.84)
No genes
Aspartate transaminase:
L-tyrosine + 2-oxoglutarate→3-(4-hydroxyphenyl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57)
ABID97_RS04080
ABID97_RS05635
ABID97_RS06550
ABID97_RS08770
ABID97_RS10885
ABID97_RS13335
ABID97_RS13990
ABID97_RS16605
ABID97_RS17310
ABID97_RS17960
ABID97_RS18035
ABID97_RS20530
ABID97_RS21960
ABID97_RS23145
ABID97_RS24840
ABID97_RS27360
ABID97_RS27595
ABID97_RS27655
4-hydroxyphenylpyruvate dioxygenase:
3-(4-hydroxyphenyl)pyruvate + dioxygen→homogentisate + CO2 (EC 1.13.11.27)
ABID97_RS19690
ABID97_RS25360
all-trans-nonaprenyl diphosphate + homogentisate + H+→2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + CO2 + diphosphate (EC 2.5.1.117)
No genes
2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + S-adenosyl-L-methionine→plastoquinol-9 + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.295)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information