| a 2,3,4-saturated fatty acid + ATP + coenzyme A→a 2,3,4-saturated fatty acyl CoA + AMP + diphosphate |
| No genes |
Acyl-CoA oxidase:
a 2,3,4-saturated fatty acyl CoA + dioxygen→a (2E)-2-enoyl-CoA + hydrogen peroxide (EC 1.3.3.6) |
| No genes |
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA (EC 4.2.1.17) |
| ABID97_RS00815 |
| ABID97_RS01435 |
| ABID97_RS02880 |
| ABID97_RS03115 |
| ABID97_RS04670 |
| ABID97_RS05865 |
| ABID97_RS05900 |
| ABID97_RS05990 |
| ABID97_RS06010 |
| ABID97_RS07755 |
| ABID97_RS10620 |
| ABID97_RS14445 |
| ABID97_RS15740 |
| ABID97_RS17005 |
| ABID97_RS17010 |
| ABID97_RS17470 |
| ABID97_RS18490 |
| ABID97_RS18595 |
| ABID97_RS18600 |
| ABID97_RS18605 |
| ABID97_RS18635 |
| ABID97_RS19410 |
| ABID97_RS20990 |
| ABID97_RS22770 |
| ABID97_RS24015 |
| ABID97_RS24805 |
| ABID97_RS26735 |
| ABID97_RS27490 |
| ABID97_RS27535 |
| ABID97_RS27555 |
| ABID97_RS27620 |
| ABID97_RS28260 |
| ABID97_RS28410 |
| ABID97_RS29050 |
3-hydroxyacyl-CoA dehydrogenase:
a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA + NAD+→a 2,3,4-saturated 3-oxoacyl-CoA + NADH + H+ (EC 1.1.1.35) |
| ABID97_RS03030 |
| ABID97_RS05865 |
| ABID97_RS06010 |
| ABID97_RS08805 |
| ABID97_RS10560 |
| ABID97_RS15740 |
| ABID97_RS17005 |
| ABID97_RS18595 |
Acetyl-CoA C-acyltransferase (in reverse):
a 2,3,4-saturated 3-oxoacyl-CoA + coenzyme A→a 2,3,4-saturated fatty acyl CoA + acetyl-CoA (EC 2.3.1.16) |
| ABID97_RS04675 |
| ABID97_RS05875 |
| ABID97_RS06005 |
| ABID97_RS10975 |
| ABID97_RS11335 |
| ABID97_RS11380 |
| ABID97_RS12420 |
| ABID97_RS15750 |
| ABID97_RS18615 |
| ABID97_RS18775 |
| ABID97_RS20240 |
| ABID97_RS24190 |
| ABID97_RS25195 |
| ABID97_RS26575 |
| ABID97_RS27835 |
| ABID97_RS28230 |
| ABID97_RS28270 |
| ABID97_RS28430 |
Citrate (Si)-synthase:
acetyl-CoA + oxaloacetate + H2O→citrate + coenzyme A + H+ (EC 2.3.3.1; 2.3.3.16; 2.3.3.3) |
| ABID97_RS01110 |
| ABID97_RS01120 |
| ABID97_RS07945 |
| ABID97_RS08480 |
| ABID97_RS26895 |
| ABID97_RS28890 |
Aconitate hydratase:
citrate→cis-aconitate + H2O (EC 4.2.1.3) |
| ABID97_RS08535 |
| ABID97_RS08550 |
Aconitate hydratase:
cis-aconitate + H2O→D-threo-isocitrate (EC 4.2.1.3) |
| ABID97_RS08535 |
| ABID97_RS08550 |
Isocitrate lyase:
D-threo-isocitrate→glyoxylate + succinate (EC 4.1.3.1) |
| ABID97_RS11115 |
Malate synthase:
acetyl-CoA + glyoxylate + H2O→(S)-malate + coenzyme A + H+ (EC 2.3.3.9) |
| ABID97_RS04710 |
Succinate dehydrogenase (ubiquinone):
succinate[in] + an electron-transfer quinone→fumarate[in] + an electron-transfer quinol (EC 1.3.5.1) |
| ABID97_RS08495 |
Fumarate hydratase (in reverse):
fumarate + H2O→(S)-malate (EC 4.2.1.2) |
| ABID97_RS17545 |
| ABID97_RS17550 |
Malate dehydrogenase:
(S)-malate + NAD+→oxaloacetate + NADH + H+ (EC 1.1.1.37; 1.1.1.38) |
| ABID97_RS05795 |
| ABID97_RS08515 |
| ABID97_RS17295 |
Phosphoenolpyruvate carboxykinase (ATP):
oxaloacetate + ATP→phosphoenolpyruvate + ADP + CO2 (EC 4.1.1.49) |
| No genes |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information