MetaCyc Pathway: adipate biosynthesis in Ralstonia solanacearum PSI07

Add experiment(s):


3-oxoadipyl-CoA thiolase:
acetyl-CoA + succinyl-CoA→3-oxoadipoyl-CoA + coenzyme A
(EC 2.3.1.174)
RPSI07_RS13370
3-hydroxyacyl-CoA dehydrogenase (in reverse):
3-oxoadipoyl-CoA + NADH + H+→(3S)-hydroxyadipyl-CoA + NAD+
(EC 1.1.1.35)
RPSI07_RS12200
RPSI07_RS14575
RPSI07_RS16345
RPSI07_RS21690
Enoyl-CoA hydratase:
(3S)-hydroxyadipyl-CoA→(2E)-5-carboxy-2-pentenoyl-CoA + H2O
(EC 4.2.1.17)
RPSI07_RS00230
RPSI07_RS00785
RPSI07_RS02315
RPSI07_RS02320
RPSI07_RS02520
RPSI07_RS10795
RPSI07_RS10800
RPSI07_RS14570
RPSI07_RS14575
RPSI07_RS16345
RPSI07_RS17635
RPSI07_RS21680
RPSI07_RS21690
RPSI07_RS22655
(2E)-5-carboxy-2-pentenoyl-CoA + FADH2→adipoyl-CoA + FAD + H+
No genes
Succinate--CoA ligase (ADP-forming) (in reverse):
adipoyl-CoA + ADP + phosphate→adipate + ATP + coenzyme A
(EC 6.2.1.5)
RPSI07_RS13360
RPSI07_RS13365
RPSI07_RS21240
RPSI07_RS21245

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information