MetaCyc Pathway: mixed acid fermentation in Ralstonia solanacearum PSI07

Add experiment(s):


Phosphoenolpyruvate carboxylase (in reverse):
phosphoenolpyruvate + hydrogen carbonate→oxaloacetate + phosphate
(EC 4.1.1.31)
RPSI07_RS13100
Pyruvate kinase (in reverse):
phosphoenolpyruvate + ADP + H+→pyruvate + ATP
(EC 2.7.1.40)
RPSI07_RS06385
RPSI07_RS21150
D-lactate dehydrogenase (in reverse):
pyruvate + NADH + H+→(R)-lactate + NAD+
(EC 1.1.1.28)
RPSI07_RS09445
Malate dehydrogenase (in reverse):
oxaloacetate + NADH + H+→(S)-malate + NAD+
(EC 1.1.1.37; 1.1.1.38)
RPSI07_RS13995
RPSI07_RS14655
Formate C-acetyltransferase (in reverse):
pyruvate + coenzyme A→acetyl-CoA + formate
(EC 2.3.1.54)
No genes
Acetaldehyde dehydrogenase (acetylating) (in reverse):
acetyl-CoA + NADH + H+→acetaldehyde + coenzyme A + NAD+
(EC 1.2.1.10)
No genes
Citrate (Si)-synthase:
acetyl-CoA + oxaloacetate + H2O→citrate + coenzyme A + H+
(EC 2.3.3.1; 2.3.3.16; 2.3.3.3)
RPSI07_RS14690
formate + H+→CO2 + H2
No genes
Fumarate hydratase:
(S)-malate→fumarate + H2O
(EC 4.2.1.2)
RPSI07_RS05900
RPSI07_RS14865
Phosphate acetyltransferase:
acetyl-CoA + phosphate→acetyl phosphate + coenzyme A
(EC 2.3.1.8)
RPSI07_RS06100
Acetate kinase (in reverse):
acetyl phosphate + ADP→acetate + ATP
(EC 2.7.2.1; 2.7.2.15)
RPSI07_RS06105
Aconitate hydratase:
citrate→cis-aconitate + H2O
(EC 4.2.1.3)
RPSI07_RS00390
RPSI07_RS00595
RPSI07_RS14625
Alcohol dehydrogenase (in reverse):
acetaldehyde + NADH + H+→ethanol + NAD+
(EC 1.1.1.1)
RPSI07_RS01725
RPSI07_RS04195
RPSI07_RS04360
RPSI07_RS06470
RPSI07_RS09450
RPSI07_RS10695
RPSI07_RS15155
RPSI07_RS20965
Succinate dehydrogenase (ubiquinone):
fumarate[in] + a menaquinol→succinate[in] + a menaquinone
(EC 1.3.5.1)
No genes
Aconitate hydratase:
cis-aconitate + H2O→D-threo-isocitrate
(EC 4.2.1.3)
RPSI07_RS00390
RPSI07_RS00595
RPSI07_RS14625
Isocitrate dehydrogenase (NADP(+)):
D-threo-isocitrate + NADP+→CO2 + 2-oxoglutarate + NADPH
(EC 1.1.1.42)
RPSI07_RS12425

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information