MetaCyc Pathway: adipate biosynthesis in Paraburkholderia sabiae LMG 24235

Add experiment(s):


3-oxoadipyl-CoA thiolase:
acetyl-CoA + succinyl-CoA→3-oxoadipoyl-CoA + coenzyme A
(EC 2.3.1.174)
QEN71_RS14170
QEN71_RS27505
3-hydroxyacyl-CoA dehydrogenase (in reverse):
3-oxoadipoyl-CoA + NADH + H+→(3S)-hydroxyadipyl-CoA + NAD+
(EC 1.1.1.35)
QEN71_RS02065
QEN71_RS21890
QEN71_RS24020
QEN71_RS29945
QEN71_RS37855
Enoyl-CoA hydratase:
(3S)-hydroxyadipyl-CoA→(2E)-5-carboxy-2-pentenoyl-CoA + H2O
(EC 4.2.1.17)
QEN71_RS01230
QEN71_RS02065
QEN71_RS02075
QEN71_RS04150
QEN71_RS05365
QEN71_RS06625
QEN71_RS08225
QEN71_RS10900
QEN71_RS12380
QEN71_RS12385
QEN71_RS15965
QEN71_RS16060
QEN71_RS19420
QEN71_RS19500
QEN71_RS21890
QEN71_RS22700
QEN71_RS24020
QEN71_RS24025
QEN71_RS26140
QEN71_RS27495
QEN71_RS27510
QEN71_RS29945
QEN71_RS30540
QEN71_RS30550
QEN71_RS30645
QEN71_RS32940
QEN71_RS33220
QEN71_RS35840
QEN71_RS38515
QEN71_RS39250
QEN71_RS39410
QEN71_RS39560
(2E)-5-carboxy-2-pentenoyl-CoA + FADH2→adipoyl-CoA + FAD + H+
No genes
Succinate--CoA ligase (ADP-forming) (in reverse):
adipoyl-CoA + ADP + phosphate→adipate + ATP + coenzyme A
(EC 6.2.1.5)
QEN71_RS02350
QEN71_RS02355
QEN71_RS18090
QEN71_RS18095
QEN71_RS20400
QEN71_RS20405
QEN71_RS33990
QEN71_RS33995

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information