| a 2,3,4-saturated fatty acid + ATP + coenzyme A→a 2,3,4-saturated fatty acyl CoA + AMP + diphosphate |
| No genes |
Acyl-CoA oxidase:
a 2,3,4-saturated fatty acyl CoA + dioxygen→a (2E)-2-enoyl-CoA + hydrogen peroxide (EC 1.3.3.6) |
| No genes |
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA (EC 4.2.1.17) |
| QEN71_RS01230 |
| QEN71_RS02065 |
| QEN71_RS02075 |
| QEN71_RS04150 |
| QEN71_RS05365 |
| QEN71_RS06625 |
| QEN71_RS08225 |
| QEN71_RS10900 |
| QEN71_RS12380 |
| QEN71_RS12385 |
| QEN71_RS15965 |
| QEN71_RS16060 |
| QEN71_RS19420 |
| QEN71_RS19500 |
| QEN71_RS21890 |
| QEN71_RS22700 |
| QEN71_RS24020 |
| QEN71_RS24025 |
| QEN71_RS26140 |
| QEN71_RS27495 |
| QEN71_RS27510 |
| QEN71_RS29945 |
| QEN71_RS30540 |
| QEN71_RS30550 |
| QEN71_RS30645 |
| QEN71_RS32940 |
| QEN71_RS33220 |
| QEN71_RS35840 |
| QEN71_RS38515 |
| QEN71_RS39250 |
| QEN71_RS39410 |
| QEN71_RS39560 |
3-hydroxyacyl-CoA dehydrogenase:
a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA + NAD+→a 2,3,4-saturated 3-oxoacyl-CoA + NADH + H+ (EC 1.1.1.35) |
| QEN71_RS02065 |
| QEN71_RS21890 |
| QEN71_RS24020 |
| QEN71_RS29945 |
| QEN71_RS37855 |
Acetyl-CoA C-acyltransferase (in reverse):
a 2,3,4-saturated 3-oxoacyl-CoA + coenzyme A→a 2,3,4-saturated fatty acyl CoA + acetyl-CoA (EC 2.3.1.16) |
| QEN71_RS01125 |
| QEN71_RS02070 |
| QEN71_RS14170 |
| QEN71_RS15980 |
| QEN71_RS18320 |
| QEN71_RS18730 |
| QEN71_RS21880 |
| QEN71_RS22175 |
| QEN71_RS22200 |
| QEN71_RS22970 |
| QEN71_RS27505 |
Citrate (Si)-synthase:
acetyl-CoA + oxaloacetate + H2O→citrate + coenzyme A + H+ (EC 2.3.3.1; 2.3.3.16; 2.3.3.3) |
| QEN71_RS02900 |
| QEN71_RS11110 |
| QEN71_RS17600 |
| QEN71_RS38525 |
| QEN71_RS39030 |
Aconitate hydratase:
citrate→cis-aconitate + H2O (EC 4.2.1.3) |
| QEN71_RS17535 |
| QEN71_RS19735 |
| QEN71_RS31060 |
| QEN71_RS41385 |
Aconitate hydratase:
cis-aconitate + H2O→D-threo-isocitrate (EC 4.2.1.3) |
| QEN71_RS17535 |
| QEN71_RS19735 |
| QEN71_RS31060 |
| QEN71_RS41385 |
Isocitrate lyase:
D-threo-isocitrate→glyoxylate + succinate (EC 4.1.3.1) |
| QEN71_RS06270 |
Malate synthase:
acetyl-CoA + glyoxylate + H2O→(S)-malate + coenzyme A + H+ (EC 2.3.3.9) |
| QEN71_RS06250 |
| QEN71_RS31820 |
Succinate dehydrogenase (ubiquinone):
succinate[in] + an electron-transfer quinone→fumarate[in] + an electron-transfer quinol (EC 1.3.5.1) |
| QEN71_RS17585 |
| QEN71_RS17590 |
| QEN71_RS38665 |
| QEN71_RS38670 |
Fumarate hydratase (in reverse):
fumarate + H2O→(S)-malate (EC 4.2.1.2) |
| QEN71_RS04360 |
| QEN71_RS11740 |
| QEN71_RS23780 |
Malate dehydrogenase:
(S)-malate + NAD+→oxaloacetate + NADH + H+ (EC 1.1.1.37; 1.1.1.38) |
| QEN71_RS10905 |
| QEN71_RS17565 |
| QEN71_RS36375 |
Phosphoenolpyruvate carboxykinase (ATP):
oxaloacetate + ATP→phosphoenolpyruvate + ADP + CO2 (EC 4.1.1.49) |
| No genes |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information