MetaCyc Pathway: Fe(II) oxidation in Hydrogenophaga sp. GW460-11-11-14-LB1

Add experiment(s):


Fe2+[out] + an oxidized rusticyanin[in]→a reduced rusticyanin[in] + Fe3+[out] (EC 1.16.9.1)
No genes
a reduced rusticyanin[out] + an oxidized Cyc1 cytochrome[out]→a reduced Cyc1 cytochrome[out] + an oxidized rusticyanin[out]
No genes
a reduced rusticyanin[out] + an oxidized CycA1 cytochrome[out]→a reduced CycA1 cytochrome[out] + an oxidized rusticyanin[out]
No genes
4 a reduced c-type cytochrome[out] + dioxygen[in] + 8 H+[in]→2 H2O[in] + 4 an oxidized c-type cytochrome[out] + 4 H+[out] (EC 7.1.1.9)
GFF1045
GFF1046
GFF3442
GFF4135
GFF4136
GFF4138
GFF5811
GFF5812
GFF688
GFF689
GFF693
a ubiquinol + 2 an oxidized CycA1 cytochrome[out] + 2 H+[in]→2 a reduced CycA1 cytochrome[out] + 4 H+[out] + a ubiquinone (EC 7.1.1.8)
No genes
a ubiquinol + NAD+[in] + 4 H+[out]→NADH[in] + 5 H+[in] + a ubiquinone (EC 7.1.1.2)
GFF3681
GFF3682
GFF3684
GFF3685
GFF3686
GFF3687
GFF3688
GFF3689
GFF3690
GFF3691
GFF3692
GFF3693
GFF3694
GFF4021

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information