MetaCyc Pathway: aerobic respiration I (cytochrome c) in Hydrogenophaga sp. GW460-11-11-14-LB1

Add experiment(s):


NADH[in] + 5 H+[in] + a ubiquinone→a ubiquinol + NAD+[in] + 4 H+[out] (EC 7.1.1.2)
GFF3681
GFF3682
GFF3684
GFF3685
GFF3686
GFF3687
GFF3688
GFF3689
GFF3690
GFF3691
GFF3692
GFF3693
GFF3694
GFF4021
Succinate dehydrogenase (ubiquinone):
succinate[in] + a ubiquinone→a ubiquinol + fumarate[in] (EC 1.3.5.1)
GFF3368
GFF3427
a ubiquinol + 2 an oxidized c-type cytochrome[out] + 2 H+[in]→2 a reduced c-type cytochrome[out] + 4 H+[out] + a ubiquinone (EC 7.1.1.8)
No genes
4 a reduced c-type cytochrome[out] + dioxygen[in] + 8 H+[in]→2 H2O[in] + 4 an oxidized c-type cytochrome[out] + 4 H+[out] (EC 7.1.1.9)
GFF1045
GFF1046
GFF3442
GFF4135
GFF4136
GFF4138
GFF5811
GFF5812
GFF688
GFF689
GFF693

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information