MetaCyc Pathway: peptidoglycan recycling II in Pectobacterium carotovorum WPP14

Add experiment(s):


a mature peptidoglycan (meso-DAP containing)→a mature peptidoglycan (meso-DAP containing) + GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-meso-DAP-D-Ala (EC 4.2.2.f)
HER17_RS02750
HER17_RS05450
HER17_RS05905
HER17_RS16185
HER17_RS16480
HER17_RS16635
GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-meso-DAP-D-Ala[out] + H+[out]→GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-meso-DAP-D-Ala[in] + H+[in]
HER17_RS15870
N-acetylmuramoyl-L-alanine amidase:
GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-meso-DAP-D-Ala + H2ON-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate + L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine
(EC 3.5.1.28)
HER17_RS02570
HER17_RS03260
HER17_RS12440
HER17_RS16500
Beta-N-acetylhexosaminidase:
N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate + H2O→1,6-anhydro-N-acetyl-β-D-muramate + N-acetyl-D-glucosamine
(EC 3.2.1.52)
HER17_RS08725
Muramoyltetrapeptide carboxypeptidase:
L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine + H2O→L-alanyl-γ-D-glutamyl-meso-diaminopimelate + D-alanine
(EC 3.4.17.13)
No genes
1,6-anhydro-N-acetyl-β-D-muramate + ATP + H2ON-acetyl-D-muramate 6-phosphate + ADP + H+ (EC 2.7.1.170)
HER17_RS09280
N-acetyl-D-muramate 6-phosphate + H2ON-acetyl-D-muramate + phosphate (EC 3.1.3.105)
No genes
N-acetyl-D-muramate + ATPN-acetyl-α-D-muramate 1-phosphate + ADP + H+ (EC 2.7.1.221)
No genes
N-acetyl-α-D-muramate 1-phosphate + H+ + UDP→UDP-N-acetyl-α-D-muramate + phosphate (EC 2.7.7.99)
No genes
L-alanyl-γ-D-glutamyl-meso-diaminopimelate + UDP-N-acetyl-α-D-muramate + ATP→UDP-MurNAc-L-Ala-γ-D-Glu-meso-DAP + ADP + H+ + phosphate (EC 6.3.2.45)
HER17_RS02615

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information