MetaCyc Pathway: purine nucleotides degradation I (plants) in Pectobacterium carotovorum WPP14

Add experiment(s):


Adenosine-phosphate deaminase:
AMP + H+ + H2O→IMP + ammonium (EC 3.5.4.17; 3.5.4.6)
No genes
5'-nucleotidase:
GMP + H2O→guanosine + phosphate (EC 3.1.3.5)
HER17_RS01725
HER17_RS02445
HER17_RS07110
HER17_RS15670
HER17_RS21310
Guanosine deaminase:
guanosine + H+ + H2O→xanthosine + ammonium (EC 3.5.4.15)
No genes
IMP dehydrogenase:
IMP + NAD+ + H2O→XMP + NADH + H+ (EC 1.1.1.205)
HER17_RS06155
5'-nucleotidase:
IMP + H2O→inosine + phosphate (EC 3.1.3.5; 3.1.3.99)
HER17_RS01725
HER17_RS02445
HER17_RS07110
HER17_RS15670
HER17_RS21310
Purine nucleosidase:
guanosine + H2O→guanine + D-ribofuranose (EC 3.2.2.1)
HER17_RS00100
HER17_RS00105
HER17_RS08990
Guanine deaminase:
guanine + H+ + H2O→xanthine + ammonium (EC 3.5.4.3)
No genes
Inosine nucleosidase:
inosine + H2O→hypoxanthine + D-ribofuranose (EC 3.2.2.2)
HER17_RS00100
HER17_RS00105
HER17_RS08990
5'-nucleotidase:
XMP + H2O→xanthosine + phosphate (EC 3.1.3.5)
HER17_RS02445
HER17_RS07110
HER17_RS15670
HER17_RS21310
Xanthine dehydrogenase:
hypoxanthine + NAD+ + H2O→xanthine + NADH + H+ (EC 1.17.1.4)
No genes
Purine nucleosidase:
xanthosine + H2O→xanthine + D-ribofuranose (EC 3.2.2.1)
HER17_RS00100
HER17_RS00105
HER17_RS08990
Xanthine dehydrogenase:
xanthine + NAD+ + H2O→urate + NADH + H+ (EC 1.17.1.4)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information