MetaCyc Pathway: indole-3-acetate biosynthesis VI (bacteria) in Pantoea agglomerans CFBP13505 P0401

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Aspartate transaminase:
L-tryptophan + 2-oxoglutarate→(indol-3-yl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27)
PagCFBP13516_RS00080
PagCFBP13516_RS01090
PagCFBP13516_RS01115 (pdxR)
PagCFBP13516_RS03520
PagCFBP13516_RS03525
PagCFBP13516_RS06375 (pdxR)
PagCFBP13516_RS06560
PagCFBP13516_RS09780
PagCFBP13516_RS12850
PagCFBP13516_RS14200
PagCFBP13516_RS18340
PagCFBP13516_RS23715
Indolepyruvate decarboxylase:
(indol-3-yl)pyruvate + H+→(indol-3-yl)acetaldehyde + CO2 (EC 4.1.1.74)
PagCFBP13516_RS05845 (ipdC)
Indole-3-acetaldehyde oxidase:
(indol-3-yl)acetaldehyde + dioxygen + H2O→(indol-3-yl)acetate + hydrogen peroxide + H+ (EC 1.2.3.7)
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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information