MetaCyc Pathway: adenosine nucleotides degradation II in Pantoea agglomerans CFBP13505 P0401

Add experiment(s):


5'-nucleotidase:
AMP + H2O→adenosine + phosphate (EC 3.1.3.5)
PagCFBP13516_RS03190
PagCFBP13516_RS04490 (surE)
PagCFBP13516_RS06555 (yfbR)
PagCFBP13516_RS14675 (ushA)
PagCFBP13516_RS16670 (yjjG)
Adenosine deaminase:
adenosine + H+ + H2O→inosine + ammonium (EC 3.5.4.4)
PagCFBP13516_RS04805 (yfiH)
PagCFBP13516_RS10540 (add)
Purine-nucleoside phosphorylase:
inosine + phosphate→hypoxanthine + α-D-ribose-1-phosphate (EC 2.4.2.1)
PagCFBP13516_RS03645 (deoD)
PagCFBP13516_RS04805 (yfiH)
PagCFBP13516_RS15195 (ppnP)
Xanthine dehydrogenase:
hypoxanthine + NAD+ + H2O→xanthine + NADH + H+ (EC 1.17.1.4)
PagCFBP13516_RS09975 (xdhA)
PagCFBP13516_RS09980 (xdhB)
PagCFBP13516_RS19565
PagCFBP13516_RS19570
Xanthine dehydrogenase:
xanthine + NAD+ + H2O→urate + NADH + H+ (EC 1.17.1.4)
PagCFBP13516_RS09975 (xdhA)
PagCFBP13516_RS09980 (xdhB)
PagCFBP13516_RS19565
PagCFBP13516_RS19570

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information