MetaCyc Pathway: Rubisco shunt in Pantoea agglomerans CFBP13505 P0401

Transketolase (in reverse): β-D-fructofuranose 6-phosphate + D-glyceraldehyde 3-phosphate→D-erythrose 4-phosphate + D-xylulose 5-phosphate (EC 2.2.1.1)

PagCFBP13505_RS07300

PagCFBP13505_RS07305

PagCFBP13505_RS16020

PagCFBP13505_RS19595

PagCFBP13505_RS19600

PagCFBP13505_RS19895

Transaldolase (in reverse): D-erythrose 4-phosphate + β-D-fructofuranose 6-phosphate→D-glyceraldehyde 3-phosphate + D-sedoheptulose 7-phosphate (EC 2.2.1.2)

PagCFBP13505_RS19900

PagCFBP13505_RS21910

Transketolase: D-sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate→D-xylulose 5-phosphate + D-ribose 5-phosphate (EC 2.2.1.1)

PagCFBP13505_RS07300

PagCFBP13505_RS07305

PagCFBP13505_RS16020

PagCFBP13505_RS19595

PagCFBP13505_RS19600

PagCFBP13505_RS19895

Ribose-5-phosphate isomerase: D-ribose 5-phosphate→D-ribulose 5-phosphate (EC 5.3.1.6)

PagCFBP13505_RS15980

Ribulose-phosphate 3-epimerase (in reverse): D-xylulose 5-phosphate→D-ribulose 5-phosphate (EC 5.1.3.1)

PagCFBP13505_RS21685

Phosphoribulokinase: D-ribulose 5-phosphate + ATP→D-ribulose-1,5-bisphosphate + ADP + H+ (EC 2.7.1.19)

PagCFBP13505_RS21605

Ribulose-bisphosphate carboxylase (in reverse): D-ribulose-1,5-bisphosphate + CO2 + H2O→2 3-phospho-D-glycerate + 2 H+ (EC 4.1.1.39)

No genes

3-phospho-D-glycerate→2-phospho-D-glycerate (EC 5.4.2.12)

PagCFBP13505_RS03700

PagCFBP13505_RS21860

Phosphopyruvate hydratase: 2-phospho-D-glycerate→phosphoenolpyruvate + H2O (EC 4.2.1.11)

PagCFBP13505_RS16835

Pyruvate kinase (in reverse): phosphoenolpyruvate + ADP + H+→pyruvate + ATP (EC 2.7.1.40)

PagCFBP13505_RS02365

PagCFBP13505_RS17750

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information