MetaCyc Pathway: L-asparagine biosynthesis III (tRNA-dependent) in Magnetospirillum magneticum AMB-1

Add experiment(s):


Glutamate synthase (NADPH):
L-glutamine + H2O→ammonia + L-glutamate + H+ (EC 1.4.1.13; 1.4.1.14; 1.4.7.1; 2.6.1.85; 3.5.1.2; 3.5.1.38; 4.1.3.27; 4.3.2.10; 4.3.3.6; 6.3.4.2; 6.3.5.13; 6.3.5.2; 6.3.5.4; 6.3.5.5; 6.3.5.6; 6.3.5.7)
AMB_RS00215
AMB_RS00420
AMB_RS00530
AMB_RS00600
AMB_RS01445
AMB_RS02685
AMB_RS02690
AMB_RS03600
AMB_RS03605
AMB_RS03760
AMB_RS06425
AMB_RS07380
AMB_RS07990
AMB_RS07995
AMB_RS08000
AMB_RS09175
AMB_RS09215
AMB_RS11780
AMB_RS14405
AMB_RS17575
AMB_RS20280
AMB_RS20340
AMB_RS20870
Aspartate--tRNA(Asn) ligase:
L-aspartate + tRNAAsn + ATP→an L-aspartyl-[tRNAAsn] + AMP + diphosphate (EC 6.1.1.23)
AMB_RS14265
Asparaginyl-tRNA synthase (glutamine-hydrolyzing):
an L-aspartyl-[tRNAAsn] + ATP→a 4-phosphooxy-L-aspartyl-[tRNAAsn] + ADP (EC 6.3.5.6)
AMB_RS07990
AMB_RS07995
AMB_RS08000
Asparaginyl-tRNA synthase (glutamine-hydrolyzing):
a 4-phosphooxy-L-aspartyl-[tRNAAsn] + ammonia→an L-asparaginyl-[tRNAAsn] + phosphate (EC 6.3.5.6)
AMB_RS07990
AMB_RS07995
AMB_RS08000

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information