MetaCyc Pathway: benzoyl-CoA degradation I (aerobic) in Magnetospirillum magneticum AMB-1

benzoyl-CoA + NADPH + dioxygen + H+→2,3-epoxy-2,3-dihydrobenzoyl-CoA + NADP+ + H2O (EC 1.14.13.208)

AMB_RS00890

2,3-epoxy-2,3-dihydrobenzoyl-CoA + 2 H2O→cis-3,4-dehydroadipyl-CoA semialdehyde + formate + H+ (EC 4.1.2.44)

AMB_RS00885

cis-3,4-dehydroadipyl-CoA semialdehyde + NADP+ + H2O→cis-3,4-dehydroadipyl-CoA + NADPH + 2 H+ (EC 1.2.1.77)

AMB_RS00880

cis-3,4-dehydroadipyl-CoA→(2E)-5-carboxy-2-pentenoyl-CoA

No genes

Enoyl-CoA hydratase (in reverse): (2E)-5-carboxy-2-pentenoyl-CoA + H2O→(3S)-hydroxyadipyl-CoA (EC 4.2.1.17)

AMB_RS00885

AMB_RS00905

AMB_RS03265

AMB_RS04340

AMB_RS06685

AMB_RS10825

AMB_RS10830

AMB_RS11335

AMB_RS13030

AMB_RS13040

AMB_RS13070

AMB_RS15050

AMB_RS18135

AMB_RS20905

3-hydroxyacyl-CoA dehydrogenase: (3S)-hydroxyadipyl-CoA + NAD+→3-oxoadipoyl-CoA + NADH + H+ (EC 1.1.1.35)

AMB_RS13065

AMB_RS15050

AMB_RS18130

3-oxoadipyl-CoA thiolase (in reverse): 3-oxoadipoyl-CoA + coenzyme A→succinyl-CoA + acetyl-CoA (EC 2.3.1.174)

AMB_RS13060

AMB_RS13850

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information