MetaCyc Pathway: muropeptide degradation in Escherichia coli BW25113

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Muramoyltetrapeptide carboxypeptidase:
L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine + H2O→L-alanyl-γ-D-glutamyl-meso-diaminopimelate + D-alanine (EC 3.4.17.13)
b1192 (ldcA)
L-alanyl-γ-D-glutamyl-meso-diaminopimelate + H2O→L-alanyl-D-glutamate + meso-diaminopimelate
b1326 (mpaA)
L-alanyl-D-glutamate→L-alanyl-L-glutamate (EC 5.1.1.20)
b1325 (ycjG)
Cytosol nonspecific dipeptidase:
L-alanyl-L-glutamate + H2O→L-glutamate + L-alanine (EC 3.4.13.18)
b0237 (pepD)

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information